Protein–RNA interactions for Protein: O88870

Best1, Bestrophin-1, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Best1O88870 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Best1O88870 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Best1O88870 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Best1O88870 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Best1O88870 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17.65■□□□□ 0.42
Best1O88870 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Best1O88870 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Best1O88870 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Best1O88870 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
Best1O88870 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Best1O88870 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Best1O88870 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Best1O88870 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Best1O88870 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Best1O88870 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Best1O88870 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.42
Best1O88870 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.42
Best1O88870 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Best1O88870 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Best1O88870 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Best1O88870 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Best1O88870 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Best1O88870 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Best1O88870 Gm10698-201ENSMUST00000182663 604 ntBASIC17.64■□□□□ 0.41
Best1O88870 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Best1O88870 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.64■□□□□ 0.41
Best1O88870 Mtag2-201ENSMUST00000058665 714 ntBASIC17.64■□□□□ 0.41
Best1O88870 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.64■□□□□ 0.41
Best1O88870 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC17.64■□□□□ 0.41
Best1O88870 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Best1O88870 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Best1O88870 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Best1O88870 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Best1O88870 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Best1O88870 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC17.63■□□□□ 0.41
Best1O88870 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Best1O88870 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Best1O88870 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Best1O88870 AC154649.1-201ENSMUST00000227392 384 ntBASIC17.63■□□□□ 0.41
Best1O88870 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Best1O88870 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Best1O88870 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Best1O88870 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Best1O88870 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Best1O88870 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Best1O88870 Gm44544-201ENSMUST00000207052 1844 ntBASIC17.63■□□□□ 0.41
Best1O88870 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Best1O88870 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Best1O88870 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Best1O88870 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Best1O88870 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.62■□□□□ 0.41
Best1O88870 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Best1O88870 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Best1O88870 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.62■□□□□ 0.41
Best1O88870 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Best1O88870 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Best1O88870 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Best1O88870 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Best1O88870 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Best1O88870 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Best1O88870 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Best1O88870 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.61■□□□□ 0.41
Best1O88870 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Best1O88870 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Best1O88870 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.61■□□□□ 0.41
Best1O88870 Mir6349-201ENSMUST00000184059 97 ntBASIC17.61■□□□□ 0.41
Best1O88870 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Best1O88870 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Best1O88870 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Best1O88870 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC17.61■□□□□ 0.41
Best1O88870 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Best1O88870 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Best1O88870 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Best1O88870 Gm15375-201ENSMUST00000119510 849 ntBASIC17.6■□□□□ 0.41
Best1O88870 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Best1O88870 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Best1O88870 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Best1O88870 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Best1O88870 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Best1O88870 Gm38345-201ENSMUST00000192635 1748 ntBASIC17.6■□□□□ 0.41
Best1O88870 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Best1O88870 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.6■□□□□ 0.41
Best1O88870 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Best1O88870 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC17.6■□□□□ 0.41
Best1O88870 Iqck-206ENSMUST00000208658 2891 ntBASIC17.59■□□□□ 0.41
Best1O88870 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Best1O88870 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Best1O88870 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC17.59■□□□□ 0.41
Best1O88870 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Best1O88870 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Best1O88870 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Best1O88870 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.59■□□□□ 0.41
Best1O88870 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Best1O88870 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC17.59■□□□□ 0.41
Best1O88870 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC17.59■□□□□ 0.41
Best1O88870 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC17.59■□□□□ 0.41
Best1O88870 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.59■□□□□ 0.41
Best1O88870 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC17.59■□□□□ 0.41
Best1O88870 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Best1O88870 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms