Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.53■□□□□ 0.4
Hcn3O88705 Mir7075-201ENSMUST00000184187 82 ntBASIC17.53■□□□□ 0.4
Hcn3O88705 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Hcn3O88705 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Hcn3O88705 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn3O88705 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn3O88705 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn3O88705 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn3O88705 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn3O88705 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn3O88705 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hcn3O88705 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Hcn3O88705 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn3O88705 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn3O88705 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn3O88705 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn3O88705 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn3O88705 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.52■□□□□ 0.4
Hcn3O88705 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn3O88705 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn3O88705 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn3O88705 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn3O88705 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn3O88705 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Hcn3O88705 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn3O88705 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn3O88705 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hcn3O88705 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
Hcn3O88705 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.52■□□□□ 0.39
Hcn3O88705 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hcn3O88705 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn3O88705 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn3O88705 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn3O88705 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Hcn3O88705 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn3O88705 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn3O88705 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn3O88705 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn3O88705 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn3O88705 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn3O88705 Gm7160-202ENSMUST00000188519 1027 ntBASIC17.51■□□□□ 0.39
Hcn3O88705 Gm8969-201ENSMUST00000199694 526 ntBASIC17.51■□□□□ 0.39
Hcn3O88705 Spcs1-204ENSMUST00000226782 949 ntBASIC17.51■□□□□ 0.39
Hcn3O88705 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn3O88705 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC17.51■□□□□ 0.39
Hcn3O88705 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn3O88705 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn3O88705 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn3O88705 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn3O88705 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn3O88705 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn3O88705 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Hcn3O88705 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Hcn3O88705 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn3O88705 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Hcn3O88705 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn3O88705 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn3O88705 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn3O88705 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn3O88705 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn3O88705 Gm12251-201ENSMUST00000117893 792 ntBASIC17.5■□□□□ 0.39
Hcn3O88705 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn3O88705 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn3O88705 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn3O88705 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn3O88705 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
Hcn3O88705 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn3O88705 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn3O88705 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn3O88705 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn3O88705 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC17.5■□□□□ 0.39
Hcn3O88705 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn3O88705 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hcn3O88705 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn3O88705 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC17.49■□□□□ 0.39
Hcn3O88705 Klhdc9-201ENSMUST00000061878 1558 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn3O88705 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn3O88705 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Hcn3O88705 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.49■□□□□ 0.39
Hcn3O88705 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn3O88705 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn3O88705 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hcn3O88705 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Hcn3O88705 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn3O88705 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn3O88705 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn3O88705 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
Hcn3O88705 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hcn3O88705 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Hcn3O88705 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn3O88705 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn3O88705 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn3O88705 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.48■□□□□ 0.39
Hcn3O88705 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn3O88705 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn3O88705 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn3O88705 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn3O88705 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn3O88705 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hcn3O88705 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 14.9 ms