Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
ClppO88696 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClppO88696 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClppO88696 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ClppO88696 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClppO88696 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClppO88696 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClppO88696 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ClppO88696 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClppO88696 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.81■□□□□ 0.44
ClppO88696 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClppO88696 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ClppO88696 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClppO88696 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClppO88696 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClppO88696 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC17.8■□□□□ 0.44
ClppO88696 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClppO88696 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClppO88696 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC17.8■□□□□ 0.44
ClppO88696 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClppO88696 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClppO88696 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ClppO88696 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.8■□□□□ 0.44
ClppO88696 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
ClppO88696 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ClppO88696 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
ClppO88696 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ClppO88696 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.79■□□□□ 0.44
ClppO88696 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClppO88696 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClppO88696 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClppO88696 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.79■□□□□ 0.44
ClppO88696 AC135637.1-201ENSMUST00000227750 365 ntBASIC17.79■□□□□ 0.44
ClppO88696 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClppO88696 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ClppO88696 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClppO88696 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClppO88696 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
ClppO88696 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ClppO88696 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClppO88696 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClppO88696 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClppO88696 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ClppO88696 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ClppO88696 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC17.78■□□□□ 0.44
ClppO88696 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClppO88696 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ClppO88696 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.78■□□□□ 0.44
ClppO88696 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
ClppO88696 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ClppO88696 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClppO88696 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ClppO88696 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClppO88696 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClppO88696 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClppO88696 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ClppO88696 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClppO88696 Gm37563-201ENSMUST00000192580 1513 ntBASIC17.77■□□□□ 0.44
ClppO88696 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClppO88696 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClppO88696 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClppO88696 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.77■□□□□ 0.44
ClppO88696 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.77■□□□□ 0.44
ClppO88696 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ClppO88696 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ClppO88696 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ClppO88696 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ClppO88696 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ClppO88696 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClppO88696 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClppO88696 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClppO88696 Gm13509-201ENSMUST00000119733 1308 ntBASIC17.76■□□□□ 0.43
ClppO88696 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClppO88696 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClppO88696 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ClppO88696 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ClppO88696 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC17.76■□□□□ 0.43
ClppO88696 Gm37856-201ENSMUST00000191634 999 ntBASIC17.76■□□□□ 0.43
ClppO88696 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ClppO88696 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
ClppO88696 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ClppO88696 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
ClppO88696 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ClppO88696 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClppO88696 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClppO88696 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ClppO88696 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ClppO88696 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ClppO88696 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ClppO88696 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ClppO88696 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
ClppO88696 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.75■□□□□ 0.43
ClppO88696 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClppO88696 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClppO88696 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClppO88696 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClppO88696 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
ClppO88696 Gm13168-201ENSMUST00000121771 632 ntBASIC17.75■□□□□ 0.43
ClppO88696 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC17.75■□□□□ 0.43
ClppO88696 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 22.4 ms