Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Slc6a20bO88575 Gm9103-201ENSMUST00000119371 405 ntBASIC20.08■□□□□ 0.81
Slc6a20bO88575 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a20bO88575 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a20bO88575 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Slc6a20bO88575 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a20bO88575 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Slc6a20bO88575 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a20bO88575 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC20.08■□□□□ 0.8
Slc6a20bO88575 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a20bO88575 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Slc6a20bO88575 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.8
Slc6a20bO88575 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a20bO88575 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a20bO88575 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.07■□□□□ 0.8
Slc6a20bO88575 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
Slc6a20bO88575 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a20bO88575 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a20bO88575 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a20bO88575 Gm45058-201ENSMUST00000205810 766 ntBASIC20.07■□□□□ 0.8
Slc6a20bO88575 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Slc6a20bO88575 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a20bO88575 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.07■□□□□ 0.8
Slc6a20bO88575 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a20bO88575 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC20.07■□□□□ 0.8
Slc6a20bO88575 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Slc6a20bO88575 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Slc6a20bO88575 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a20bO88575 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a20bO88575 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a20bO88575 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a20bO88575 AC166341.7-201ENSMUST00000221698 126 ntBASIC20.06■□□□□ 0.8
Slc6a20bO88575 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a20bO88575 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Slc6a20bO88575 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a20bO88575 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a20bO88575 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a20bO88575 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Slc6a20bO88575 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a20bO88575 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a20bO88575 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC20.05■□□□□ 0.8
Slc6a20bO88575 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a20bO88575 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a20bO88575 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a20bO88575 Gm14464-201ENSMUST00000119658 1254 ntBASIC20.05■□□□□ 0.8
Slc6a20bO88575 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC20.05■□□□□ 0.8
Slc6a20bO88575 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Slc6a20bO88575 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a20bO88575 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a20bO88575 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Slc6a20bO88575 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a20bO88575 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a20bO88575 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a20bO88575 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Slc6a20bO88575 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Slc6a20bO88575 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a20bO88575 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a20bO88575 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a20bO88575 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Slc6a20bO88575 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Slc6a20bO88575 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Slc6a20bO88575 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a20bO88575 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Slc6a20bO88575 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a20bO88575 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a20bO88575 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a20bO88575 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a20bO88575 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC20.03■□□□□ 0.8
Slc6a20bO88575 Mir6349-201ENSMUST00000184059 97 ntBASIC20.03■□□□□ 0.8
Slc6a20bO88575 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC20.03■□□□□ 0.8
Slc6a20bO88575 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.03■□□□□ 0.8
Slc6a20bO88575 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.03■□□□□ 0.8
Slc6a20bO88575 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a20bO88575 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a20bO88575 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.03■□□□□ 0.8
Slc6a20bO88575 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a20bO88575 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Slc6a20bO88575 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a20bO88575 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a20bO88575 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a20bO88575 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
Slc6a20bO88575 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a20bO88575 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a20bO88575 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a20bO88575 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a20bO88575 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Slc6a20bO88575 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.02■□□□□ 0.79
Slc6a20bO88575 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Slc6a20bO88575 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC20.02■□□□□ 0.79
Slc6a20bO88575 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC20.01■□□□□ 0.79
Slc6a20bO88575 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC20.01■□□□□ 0.79
Slc6a20bO88575 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Slc6a20bO88575 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a20bO88575 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
Slc6a20bO88575 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Slc6a20bO88575 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a20bO88575 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC20.01■□□□□ 0.79
Slc6a20bO88575 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
Slc6a20bO88575 Blcap-202ENSMUST00000109528 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Slc6a20bO88575 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms