Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn1O88551 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn1O88551 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn1O88551 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn1O88551 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC15.68■□□□□ 0.1
Cldn1O88551 Gm6433-201ENSMUST00000118634 875 ntBASIC15.68■□□□□ 0.1
Cldn1O88551 Gm43799-201ENSMUST00000201845 579 ntBASIC15.68■□□□□ 0.1
Cldn1O88551 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.68■□□□□ 0.1
Cldn1O88551 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.68■□□□□ 0.1
Cldn1O88551 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn1O88551 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn1O88551 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn1O88551 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn1O88551 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cldn1O88551 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn1O88551 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn1O88551 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cldn1O88551 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Cldn1O88551 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn1O88551 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn1O88551 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.67■□□□□ 0.1
Cldn1O88551 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn1O88551 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC15.67■□□□□ 0.1
Cldn1O88551 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC15.67■□□□□ 0.1
Cldn1O88551 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn1O88551 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn1O88551 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn1O88551 Gm5417-201ENSMUST00000079706 384 ntBASIC15.67■□□□□ 0.1
Cldn1O88551 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn1O88551 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn1O88551 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn1O88551 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Cldn1O88551 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.67■□□□□ 0.1
Cldn1O88551 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn1O88551 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn1O88551 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Cldn1O88551 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn1O88551 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Cldn1O88551 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn1O88551 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn1O88551 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn1O88551 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn1O88551 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn1O88551 Gm13158-201ENSMUST00000122007 736 ntBASIC15.66■□□□□ 0.1
Cldn1O88551 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cldn1O88551 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC15.66■□□□□ 0.1
Cldn1O88551 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cldn1O88551 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn1O88551 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Cldn1O88551 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn1O88551 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Cldn1O88551 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn1O88551 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC15.66■□□□□ 0.1
Cldn1O88551 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Cldn1O88551 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Cldn1O88551 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldn1O88551 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldn1O88551 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldn1O88551 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cldn1O88551 Cradd-205ENSMUST00000220279 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldn1O88551 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldn1O88551 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cldn1O88551 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cldn1O88551 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC15.65■□□□□ 0.1
Cldn1O88551 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Cldn1O88551 AC163280.1-201ENSMUST00000228194 1100 ntBASIC15.65■□□□□ 0.1
Cldn1O88551 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Cldn1O88551 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Cldn1O88551 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cldn1O88551 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Cldn1O88551 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cldn1O88551 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC15.64■□□□□ 0.09
Cldn1O88551 Gm15847-201ENSMUST00000121417 1065 ntBASIC15.64■□□□□ 0.09
Cldn1O88551 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Cldn1O88551 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cldn1O88551 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cldn1O88551 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cldn1O88551 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cldn1O88551 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC15.64■□□□□ 0.09
Cldn1O88551 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cldn1O88551 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cldn1O88551 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cldn1O88551 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Cldn1O88551 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Cldn1O88551 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldn1O88551 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cldn1O88551 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC15.63■□□□□ 0.09
Cldn1O88551 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
Cldn1O88551 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cldn1O88551 Gm21362-201ENSMUST00000194272 928 ntBASIC15.63■□□□□ 0.09
Cldn1O88551 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC15.63■□□□□ 0.09
Cldn1O88551 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC15.63■□□□□ 0.09
Cldn1O88551 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Cldn1O88551 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Cldn1O88551 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cldn1O88551 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldn1O88551 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Cldn1O88551 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.63■□□□□ 0.09
Cldn1O88551 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Cldn1O88551 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms