Protein–RNA interactions for Protein: O88456

Capns1, Calpain small subunit 1, mousemouse

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capns1O88456 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Capns1O88456 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Capns1O88456 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Capns1O88456 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Capns1O88456 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Capns1O88456 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Capns1O88456 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Capns1O88456 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Capns1O88456 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Capns1O88456 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.3
Capns1O88456 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
Capns1O88456 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Capns1O88456 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Capns1O88456 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Capns1O88456 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.89■□□□□ 0.29
Capns1O88456 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Capns1O88456 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Capns1O88456 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Capns1O88456 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Capns1O88456 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Capns1O88456 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Capns1O88456 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Capns1O88456 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Capns1O88456 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Capns1O88456 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Capns1O88456 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Capns1O88456 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Capns1O88456 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Capns1O88456 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Capns1O88456 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Capns1O88456 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC16.88■□□□□ 0.29
Capns1O88456 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Capns1O88456 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Capns1O88456 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capns1O88456 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Capns1O88456 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capns1O88456 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capns1O88456 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Capns1O88456 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capns1O88456 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Capns1O88456 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Capns1O88456 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capns1O88456 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Capns1O88456 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capns1O88456 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC16.88■□□□□ 0.29
Capns1O88456 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capns1O88456 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Capns1O88456 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capns1O88456 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC16.88■□□□□ 0.29
Capns1O88456 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capns1O88456 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Capns1O88456 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Capns1O88456 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Capns1O88456 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Capns1O88456 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
Capns1O88456 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.87■□□□□ 0.29
Capns1O88456 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.87■□□□□ 0.29
Capns1O88456 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC16.87■□□□□ 0.29
Capns1O88456 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Capns1O88456 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Capns1O88456 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Capns1O88456 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Capns1O88456 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Capns1O88456 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Capns1O88456 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Capns1O88456 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Capns1O88456 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Capns1O88456 Gm43213-201ENSMUST00000151866 1790 ntBASIC16.87■□□□□ 0.29
Capns1O88456 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Capns1O88456 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Capns1O88456 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Capns1O88456 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Capns1O88456 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
Capns1O88456 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC16.86■□□□□ 0.29
Capns1O88456 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Capns1O88456 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.86■□□□□ 0.29
Capns1O88456 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Capns1O88456 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC16.86■□□□□ 0.29
Capns1O88456 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Capns1O88456 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Capns1O88456 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.86■□□□□ 0.29
Capns1O88456 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Capns1O88456 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Capns1O88456 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Capns1O88456 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Capns1O88456 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Capns1O88456 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Capns1O88456 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Capns1O88456 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Capns1O88456 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Capns1O88456 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Capns1O88456 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Capns1O88456 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
Capns1O88456 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Capns1O88456 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Capns1O88456 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC16.85■□□□□ 0.29
Capns1O88456 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Capns1O88456 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Capns1O88456 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Capns1O88456 Gm10129-202ENSMUST00000193100 1316 ntBASIC16.85■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms