Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC17.93■□□□□ 0.46
Cacna1hO88427 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC17.93■□□□□ 0.46
Cacna1hO88427 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1hO88427 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1hO88427 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1hO88427 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1hO88427 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1hO88427 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
Cacna1hO88427 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1hO88427 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Cacna1hO88427 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.93■□□□□ 0.46
Cacna1hO88427 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cacna1hO88427 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1hO88427 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1hO88427 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1hO88427 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1hO88427 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1hO88427 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1hO88427 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.92■□□□□ 0.46
Cacna1hO88427 Gm5864-201ENSMUST00000202263 970 ntBASIC17.92■□□□□ 0.46
Cacna1hO88427 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1hO88427 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1hO88427 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC17.92■□□□□ 0.46
Cacna1hO88427 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1hO88427 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1hO88427 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1hO88427 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1hO88427 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cacna1hO88427 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC17.91■□□□□ 0.46
Cacna1hO88427 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1hO88427 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1hO88427 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1hO88427 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cacna1hO88427 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Cacna1hO88427 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Cacna1hO88427 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.91■□□□□ 0.46
Cacna1hO88427 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1hO88427 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1hO88427 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1hO88427 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1hO88427 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1hO88427 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1hO88427 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
Cacna1hO88427 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1hO88427 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cacna1hO88427 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC17.89■□□□□ 0.46
Cacna1hO88427 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cacna1hO88427 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cacna1hO88427 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Cacna1hO88427 Gm27357-201ENSMUST00000183754 135 ntBASIC17.89■□□□□ 0.45
Cacna1hO88427 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1hO88427 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1hO88427 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1hO88427 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1hO88427 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.89■□□□□ 0.45
Cacna1hO88427 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1hO88427 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cacna1hO88427 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1hO88427 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cacna1hO88427 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1hO88427 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1hO88427 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
Cacna1hO88427 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.88■□□□□ 0.45
Cacna1hO88427 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1hO88427 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cacna1hO88427 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC17.88■□□□□ 0.45
Cacna1hO88427 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1hO88427 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.88■□□□□ 0.45
Cacna1hO88427 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cacna1hO88427 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cacna1hO88427 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Cacna1hO88427 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
Cacna1hO88427 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1hO88427 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.87■□□□□ 0.45
Cacna1hO88427 Gm38285-201ENSMUST00000192928 922 ntBASIC17.87■□□□□ 0.45
Cacna1hO88427 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1hO88427 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1hO88427 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1hO88427 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1hO88427 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1hO88427 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC17.87■□□□□ 0.45
Cacna1hO88427 Gm18733-201ENSMUST00000173950 856 ntBASIC17.87■□□□□ 0.45
Cacna1hO88427 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC17.87■□□□□ 0.45
Cacna1hO88427 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Cacna1hO88427 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Cacna1hO88427 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cacna1hO88427 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1hO88427 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.86■□□□□ 0.45
Cacna1hO88427 Spsb2-203ENSMUST00000112473 1322 ntBASIC17.86■□□□□ 0.45
Cacna1hO88427 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1hO88427 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1hO88427 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Cacna1hO88427 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1hO88427 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1hO88427 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1hO88427 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1hO88427 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Cacna1hO88427 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
Cacna1hO88427 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Cacna1hO88427 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms