Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tulp3O88413 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tulp3O88413 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tulp3O88413 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tulp3O88413 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tulp3O88413 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC17.11■□□□□ 0.33
Tulp3O88413 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.11■□□□□ 0.33
Tulp3O88413 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC17.11■□□□□ 0.33
Tulp3O88413 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tulp3O88413 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tulp3O88413 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tulp3O88413 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tulp3O88413 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tulp3O88413 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tulp3O88413 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Tulp3O88413 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tulp3O88413 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
Tulp3O88413 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Tulp3O88413 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC17.11■□□□□ 0.33
Tulp3O88413 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tulp3O88413 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tulp3O88413 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Tulp3O88413 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.11■□□□□ 0.33
Tulp3O88413 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tulp3O88413 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Tulp3O88413 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tulp3O88413 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tulp3O88413 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tulp3O88413 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Tulp3O88413 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tulp3O88413 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tulp3O88413 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC17.1■□□□□ 0.33
Tulp3O88413 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tulp3O88413 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Tulp3O88413 Smad6-203ENSMUST00000179458 273 ntBASIC17.1■□□□□ 0.33
Tulp3O88413 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC17.1■□□□□ 0.33
Tulp3O88413 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tulp3O88413 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.1■□□□□ 0.33
Tulp3O88413 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tulp3O88413 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tulp3O88413 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Tulp3O88413 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Tulp3O88413 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tulp3O88413 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tulp3O88413 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Tulp3O88413 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tulp3O88413 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tulp3O88413 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Tulp3O88413 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC17.09■□□□□ 0.33
Tulp3O88413 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
Tulp3O88413 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
Tulp3O88413 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.09■□□□□ 0.33
Tulp3O88413 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.09■□□□□ 0.33
Tulp3O88413 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC17.09■□□□□ 0.33
Tulp3O88413 Gm9847-201ENSMUST00000052528 599 ntBASIC17.09■□□□□ 0.33
Tulp3O88413 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
Tulp3O88413 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Tulp3O88413 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC17.09■□□□□ 0.33
Tulp3O88413 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
Tulp3O88413 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tulp3O88413 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tulp3O88413 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tulp3O88413 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tulp3O88413 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tulp3O88413 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.08■□□□□ 0.32
Tulp3O88413 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tulp3O88413 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
Tulp3O88413 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
Tulp3O88413 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
Tulp3O88413 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tulp3O88413 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tulp3O88413 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC17.07■□□□□ 0.32
Tulp3O88413 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tulp3O88413 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tulp3O88413 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tulp3O88413 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tulp3O88413 Gm9194-201ENSMUST00000220749 1447 ntBASIC17.07■□□□□ 0.32
Tulp3O88413 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tulp3O88413 C1qtnf4-201ENSMUST00000111466 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tulp3O88413 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tulp3O88413 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Tulp3O88413 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tulp3O88413 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
Tulp3O88413 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.07■□□□□ 0.32
Tulp3O88413 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tulp3O88413 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tulp3O88413 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tulp3O88413 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC17.07■□□□□ 0.32
Tulp3O88413 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Tulp3O88413 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tulp3O88413 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tulp3O88413 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tulp3O88413 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tulp3O88413 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tulp3O88413 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tulp3O88413 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tulp3O88413 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tulp3O88413 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Tulp3O88413 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Tulp3O88413 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC17.06■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms