Protein–RNA interactions for Protein: O88338

Cdh16, Cadherin-16, mousemouse

Predictions only

Length 830 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh16O88338 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh16O88338 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Cdh16O88338 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
Cdh16O88338 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh16O88338 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh16O88338 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Cdh16O88338 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh16O88338 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
Cdh16O88338 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh16O88338 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
Cdh16O88338 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh16O88338 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh16O88338 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh16O88338 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh16O88338 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh16O88338 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.94■□□□□ 0.46
Cdh16O88338 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh16O88338 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Cdh16O88338 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
Cdh16O88338 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh16O88338 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh16O88338 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh16O88338 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh16O88338 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh16O88338 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh16O88338 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC17.93■□□□□ 0.46
Cdh16O88338 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh16O88338 Gm45906-201ENSMUST00000208911 1430 ntBASIC17.93■□□□□ 0.46
Cdh16O88338 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh16O88338 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh16O88338 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh16O88338 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.93■□□□□ 0.46
Cdh16O88338 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh16O88338 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh16O88338 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Cdh16O88338 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Cdh16O88338 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh16O88338 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh16O88338 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Cdh16O88338 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh16O88338 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC17.92■□□□□ 0.46
Cdh16O88338 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC17.92■□□□□ 0.46
Cdh16O88338 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh16O88338 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.92■□□□□ 0.46
Cdh16O88338 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh16O88338 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Cdh16O88338 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Cdh16O88338 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh16O88338 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh16O88338 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh16O88338 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh16O88338 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh16O88338 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh16O88338 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh16O88338 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh16O88338 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.91■□□□□ 0.46
Cdh16O88338 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC17.91■□□□□ 0.46
Cdh16O88338 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh16O88338 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh16O88338 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Cdh16O88338 Gm10209-201ENSMUST00000203397 1607 ntBASIC17.9■□□□□ 0.46
Cdh16O88338 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
Cdh16O88338 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh16O88338 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh16O88338 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh16O88338 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh16O88338 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
Cdh16O88338 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh16O88338 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh16O88338 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh16O88338 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh16O88338 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh16O88338 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh16O88338 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh16O88338 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh16O88338 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh16O88338 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.9■□□□□ 0.46
Cdh16O88338 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Cdh16O88338 Gm43294-201ENSMUST00000202850 2490 ntBASIC17.9■□□□□ 0.46
Cdh16O88338 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.9■□□□□ 0.46
Cdh16O88338 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh16O88338 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
Cdh16O88338 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cdh16O88338 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Cdh16O88338 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh16O88338 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh16O88338 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh16O88338 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh16O88338 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Cdh16O88338 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.88■□□□□ 0.45
Cdh16O88338 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh16O88338 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh16O88338 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cdh16O88338 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh16O88338 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Cdh16O88338 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh16O88338 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh16O88338 Gm5576-201ENSMUST00000075809 1236 ntBASIC17.88■□□□□ 0.45
Cdh16O88338 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Cdh16O88338 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms