Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ubr1O70481 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Ubr1O70481 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ubr1O70481 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC24.03■■□□□ 1.44
Ubr1O70481 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC24.03■■□□□ 1.44
Ubr1O70481 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC24.03■■□□□ 1.44
Ubr1O70481 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ubr1O70481 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Ubr1O70481 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ubr1O70481 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Ubr1O70481 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC24.03■■□□□ 1.44
Ubr1O70481 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ubr1O70481 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ubr1O70481 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC24.03■■□□□ 1.44
Ubr1O70481 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Ubr1O70481 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
Ubr1O70481 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC24.02■■□□□ 1.44
Ubr1O70481 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ubr1O70481 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC24.02■■□□□ 1.44
Ubr1O70481 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ubr1O70481 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ubr1O70481 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ubr1O70481 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Ubr1O70481 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ubr1O70481 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Ubr1O70481 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ubr1O70481 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ubr1O70481 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ubr1O70481 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ubr1O70481 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ubr1O70481 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC24.01■■□□□ 1.43
Ubr1O70481 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Ubr1O70481 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
Ubr1O70481 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Ubr1O70481 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC24.01■■□□□ 1.43
Ubr1O70481 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ubr1O70481 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC24■■□□□ 1.43
Ubr1O70481 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC24■■□□□ 1.43
Ubr1O70481 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC24■■□□□ 1.43
Ubr1O70481 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ubr1O70481 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
Ubr1O70481 Gm38345-201ENSMUST00000192635 1748 ntBASIC24■■□□□ 1.43
Ubr1O70481 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC24■■□□□ 1.43
Ubr1O70481 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
Ubr1O70481 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Ubr1O70481 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC23.99■■□□□ 1.43
Ubr1O70481 Rncr4-201ENSMUST00000194541 2234 ntBASIC23.99■■□□□ 1.43
Ubr1O70481 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ubr1O70481 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ubr1O70481 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Ubr1O70481 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Ubr1O70481 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ubr1O70481 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC23.99■■□□□ 1.43
Ubr1O70481 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Ubr1O70481 Gm9194-201ENSMUST00000220749 1447 ntBASIC23.99■■□□□ 1.43
Ubr1O70481 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Ubr1O70481 AC166341.7-201ENSMUST00000221698 126 ntBASIC23.98■■□□□ 1.43
Ubr1O70481 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Ubr1O70481 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ubr1O70481 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ubr1O70481 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC23.98■■□□□ 1.43
Ubr1O70481 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ubr1O70481 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Ubr1O70481 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC23.98■■□□□ 1.43
Ubr1O70481 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC23.98■■□□□ 1.43
Ubr1O70481 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC23.98■■□□□ 1.43
Ubr1O70481 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Ubr1O70481 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Ubr1O70481 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ubr1O70481 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ubr1O70481 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ubr1O70481 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ubr1O70481 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ubr1O70481 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ubr1O70481 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ubr1O70481 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Ubr1O70481 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC23.97■■□□□ 1.43
Ubr1O70481 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ubr1O70481 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
Ubr1O70481 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ubr1O70481 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC23.96■■□□□ 1.43
Ubr1O70481 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ubr1O70481 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ubr1O70481 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.96■■□□□ 1.43
Ubr1O70481 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ubr1O70481 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Ubr1O70481 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC23.95■■□□□ 1.43
Ubr1O70481 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC23.95■■□□□ 1.42
Ubr1O70481 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC23.95■■□□□ 1.42
Ubr1O70481 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC23.95■■□□□ 1.42
Ubr1O70481 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ubr1O70481 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ubr1O70481 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Ubr1O70481 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Ubr1O70481 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Ubr1O70481 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Ubr1O70481 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ubr1O70481 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC23.93■■□□□ 1.42
Ubr1O70481 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Ubr1O70481 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Retrieved 100 of 76,532 protein–RNA pairs in 18.4 ms