Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.23■□□□□ 0.51
Ldb2O55203 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb2O55203 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb2O55203 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb2O55203 Gm22325-201ENSMUST00000158904 308 ntBASIC18.23■□□□□ 0.51
Ldb2O55203 Gm6211-202ENSMUST00000167849 925 ntBASIC18.23■□□□□ 0.51
Ldb2O55203 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb2O55203 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb2O55203 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb2O55203 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.23■□□□□ 0.51
Ldb2O55203 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb2O55203 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb2O55203 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb2O55203 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ldb2O55203 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ldb2O55203 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ldb2O55203 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.22■□□□□ 0.51
Ldb2O55203 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.22■□□□□ 0.51
Ldb2O55203 Clint1-202ENSMUST00000109261 3365 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ldb2O55203 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC18.22■□□□□ 0.51
Ldb2O55203 Gm13148-201ENSMUST00000118892 745 ntBASIC18.22■□□□□ 0.51
Ldb2O55203 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
Ldb2O55203 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC18.22■□□□□ 0.51
Ldb2O55203 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ldb2O55203 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.22■□□□□ 0.51
Ldb2O55203 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC18.22■□□□□ 0.51
Ldb2O55203 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ldb2O55203 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ldb2O55203 Fam105a-203ENSMUST00000226170 3043 ntBASIC18.22■□□□□ 0.51
Ldb2O55203 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
Ldb2O55203 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ldb2O55203 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ldb2O55203 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ldb2O55203 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ldb2O55203 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Ldb2O55203 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ldb2O55203 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC18.21■□□□□ 0.51
Ldb2O55203 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ldb2O55203 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.21■□□□□ 0.51
Ldb2O55203 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ldb2O55203 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ldb2O55203 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ldb2O55203 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ldb2O55203 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Ldb2O55203 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ldb2O55203 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ldb2O55203 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ldb2O55203 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Ldb2O55203 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ldb2O55203 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ldb2O55203 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Ldb2O55203 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
Ldb2O55203 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ldb2O55203 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ldb2O55203 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb2O55203 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb2O55203 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb2O55203 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb2O55203 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb2O55203 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb2O55203 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
Ldb2O55203 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb2O55203 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb2O55203 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC18.19■□□□□ 0.5
Ldb2O55203 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb2O55203 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb2O55203 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb2O55203 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb2O55203 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
Ldb2O55203 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb2O55203 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb2O55203 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Ldb2O55203 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ldb2O55203 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
Ldb2O55203 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ldb2O55203 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ldb2O55203 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.18■□□□□ 0.5
Ldb2O55203 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Ldb2O55203 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ldb2O55203 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Ldb2O55203 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC18.18■□□□□ 0.5
Ldb2O55203 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ldb2O55203 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC18.18■□□□□ 0.5
Ldb2O55203 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ldb2O55203 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ldb2O55203 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ldb2O55203 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ldb2O55203 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ldb2O55203 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ldb2O55203 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ldb2O55203 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Ldb2O55203 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ldb2O55203 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ldb2O55203 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.17■□□□□ 0.5
Ldb2O55203 Gm12933-201ENSMUST00000120203 872 ntBASIC18.17■□□□□ 0.5
Ldb2O55203 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC18.17■□□□□ 0.5
Ldb2O55203 Mir5133-201ENSMUST00000174955 77 ntBASIC18.17■□□□□ 0.5
Ldb2O55203 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Ldb2O55203 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
Ldb2O55203 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms