Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.7■□□□□ 0.42
Cacna1bO55017 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1bO55017 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Cacna1bO55017 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1bO55017 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1bO55017 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1bO55017 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1bO55017 Gm18032-201ENSMUST00000222541 538 ntBASIC17.69■□□□□ 0.42
Cacna1bO55017 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1bO55017 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1bO55017 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1bO55017 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Cacna1bO55017 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1bO55017 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1bO55017 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1bO55017 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1bO55017 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Cacna1bO55017 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1bO55017 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC17.68■□□□□ 0.42
Cacna1bO55017 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1bO55017 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Cacna1bO55017 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1bO55017 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Cacna1bO55017 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.68■□□□□ 0.42
Cacna1bO55017 Gm3375-201ENSMUST00000203929 796 ntBASIC17.68■□□□□ 0.42
Cacna1bO55017 Gm10138-203ENSMUST00000206952 366 ntBASIC17.68■□□□□ 0.42
Cacna1bO55017 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.68■□□□□ 0.42
Cacna1bO55017 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Cacna1bO55017 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1bO55017 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC17.67■□□□□ 0.42
Cacna1bO55017 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1bO55017 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.67■□□□□ 0.42
Cacna1bO55017 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1bO55017 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Cacna1bO55017 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1bO55017 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1bO55017 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1bO55017 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
Cacna1bO55017 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1bO55017 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1bO55017 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1bO55017 Gm45640-201ENSMUST00000210665 1896 ntBASIC17.66■□□□□ 0.42
Cacna1bO55017 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1bO55017 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Cacna1bO55017 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1bO55017 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1bO55017 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1bO55017 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1bO55017 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
Cacna1bO55017 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Cacna1bO55017 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1bO55017 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
Cacna1bO55017 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC17.65■□□□□ 0.42
Cacna1bO55017 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1bO55017 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.65■□□□□ 0.42
Cacna1bO55017 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1bO55017 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1bO55017 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC17.65■□□□□ 0.42
Cacna1bO55017 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1bO55017 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.65■□□□□ 0.42
Cacna1bO55017 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC17.65■□□□□ 0.42
Cacna1bO55017 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.65■□□□□ 0.42
Cacna1bO55017 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.65■□□□□ 0.42
Cacna1bO55017 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1bO55017 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
Cacna1bO55017 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1bO55017 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1bO55017 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Cacna1bO55017 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Cacna1bO55017 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1bO55017 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1bO55017 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1bO55017 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1bO55017 Gm45058-201ENSMUST00000205810 766 ntBASIC17.64■□□□□ 0.41
Cacna1bO55017 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.64■□□□□ 0.41
Cacna1bO55017 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1bO55017 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1bO55017 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1bO55017 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Cacna1bO55017 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1bO55017 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1bO55017 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Cacna1bO55017 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1bO55017 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1bO55017 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Cacna1bO55017 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1bO55017 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1bO55017 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1bO55017 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1bO55017 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1bO55017 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1bO55017 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cacna1bO55017 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.63■□□□□ 0.41
Cacna1bO55017 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Cacna1bO55017 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.63■□□□□ 0.41
Cacna1bO55017 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1bO55017 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Cacna1bO55017 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.62■□□□□ 0.41
Cacna1bO55017 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Cacna1bO55017 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms