Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC20.3■□□□□ 0.84
Prom1O54990 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prom1O54990 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Prom1O54990 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prom1O54990 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prom1O54990 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC20.29■□□□□ 0.84
Prom1O54990 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC20.29■□□□□ 0.84
Prom1O54990 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Prom1O54990 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Prom1O54990 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Prom1O54990 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prom1O54990 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Prom1O54990 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prom1O54990 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
Prom1O54990 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prom1O54990 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Prom1O54990 Gm16042-201ENSMUST00000204813 1247 ntBASIC20.28■□□□□ 0.84
Prom1O54990 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Prom1O54990 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prom1O54990 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prom1O54990 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC20.28■□□□□ 0.84
Prom1O54990 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prom1O54990 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Prom1O54990 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Prom1O54990 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Prom1O54990 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prom1O54990 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prom1O54990 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prom1O54990 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prom1O54990 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC20.27■□□□□ 0.84
Prom1O54990 Gm11643-201ENSMUST00000119578 864 ntBASIC20.27■□□□□ 0.84
Prom1O54990 Gm37292-201ENSMUST00000192062 758 ntBASIC20.27■□□□□ 0.84
Prom1O54990 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.27■□□□□ 0.84
Prom1O54990 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Prom1O54990 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
Prom1O54990 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prom1O54990 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prom1O54990 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC20.26■□□□□ 0.83
Prom1O54990 Gm15375-201ENSMUST00000119510 849 ntBASIC20.26■□□□□ 0.83
Prom1O54990 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Prom1O54990 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prom1O54990 Gm10138-203ENSMUST00000206952 366 ntBASIC20.26■□□□□ 0.83
Prom1O54990 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.26■□□□□ 0.83
Prom1O54990 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prom1O54990 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prom1O54990 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prom1O54990 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Prom1O54990 Gm15853-202ENSMUST00000195518 2041 ntBASIC20.26■□□□□ 0.83
Prom1O54990 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prom1O54990 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prom1O54990 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prom1O54990 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prom1O54990 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prom1O54990 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prom1O54990 Tgif1-209ENSMUST00000166395 1714 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Prom1O54990 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prom1O54990 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC20.25■□□□□ 0.83
Prom1O54990 Gm10231-201ENSMUST00000181584 441 ntBASIC20.25■□□□□ 0.83
Prom1O54990 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prom1O54990 Gm38285-201ENSMUST00000192928 922 ntBASIC20.25■□□□□ 0.83
Prom1O54990 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC20.25■□□□□ 0.83
Prom1O54990 Gm10175-202ENSMUST00000208752 441 ntBASIC20.25■□□□□ 0.83
Prom1O54990 Arhgef4-208ENSMUST00000211073 171 ntBASIC20.25■□□□□ 0.83
Prom1O54990 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prom1O54990 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prom1O54990 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prom1O54990 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prom1O54990 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prom1O54990 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.25■□□□□ 0.83
Prom1O54990 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC20.25■□□□□ 0.83
Prom1O54990 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prom1O54990 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prom1O54990 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Prom1O54990 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prom1O54990 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC20.24■□□□□ 0.83
Prom1O54990 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prom1O54990 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prom1O54990 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prom1O54990 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Prom1O54990 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Prom1O54990 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prom1O54990 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prom1O54990 Gm37805-201ENSMUST00000192612 1094 ntBASIC20.24■□□□□ 0.83
Prom1O54990 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prom1O54990 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Prom1O54990 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.24■□□□□ 0.83
Prom1O54990 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Prom1O54990 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prom1O54990 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prom1O54990 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prom1O54990 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prom1O54990 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Prom1O54990 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Prom1O54990 Gm43545-201ENSMUST00000196765 2779 ntBASIC20.23■□□□□ 0.83
Prom1O54990 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Prom1O54990 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prom1O54990 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prom1O54990 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Prom1O54990 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Prom1O54990 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms