Protein–RNA interactions for Protein: O54804

Chka, Choline kinase alpha, mousemouse

Predictions only

Length 453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ChkaO54804 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ChkaO54804 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ChkaO54804 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ChkaO54804 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ChkaO54804 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ChkaO54804 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.5■□□□□ 0.55
ChkaO54804 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
ChkaO54804 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ChkaO54804 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.5■□□□□ 0.55
ChkaO54804 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ChkaO54804 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ChkaO54804 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.5■□□□□ 0.55
ChkaO54804 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ChkaO54804 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ChkaO54804 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ChkaO54804 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ChkaO54804 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.49■□□□□ 0.55
ChkaO54804 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.49■□□□□ 0.55
ChkaO54804 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.49■□□□□ 0.55
ChkaO54804 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ChkaO54804 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.49■□□□□ 0.55
ChkaO54804 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ChkaO54804 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
ChkaO54804 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ChkaO54804 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ChkaO54804 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ChkaO54804 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.48■□□□□ 0.55
ChkaO54804 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.48■□□□□ 0.55
ChkaO54804 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ChkaO54804 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
ChkaO54804 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ChkaO54804 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
ChkaO54804 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
ChkaO54804 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ChkaO54804 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ChkaO54804 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ChkaO54804 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ChkaO54804 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ChkaO54804 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.47■□□□□ 0.55
ChkaO54804 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ChkaO54804 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ChkaO54804 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC18.47■□□□□ 0.55
ChkaO54804 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
ChkaO54804 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
ChkaO54804 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ChkaO54804 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ChkaO54804 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
ChkaO54804 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
ChkaO54804 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
ChkaO54804 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
ChkaO54804 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ChkaO54804 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ChkaO54804 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ChkaO54804 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ChkaO54804 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
ChkaO54804 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.46■□□□□ 0.55
ChkaO54804 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ChkaO54804 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
ChkaO54804 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ChkaO54804 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ChkaO54804 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
ChkaO54804 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.45■□□□□ 0.54
ChkaO54804 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ChkaO54804 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ChkaO54804 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ChkaO54804 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.45■□□□□ 0.54
ChkaO54804 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
ChkaO54804 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
ChkaO54804 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ChkaO54804 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
ChkaO54804 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ChkaO54804 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
ChkaO54804 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
ChkaO54804 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.45■□□□□ 0.54
ChkaO54804 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.44■□□□□ 0.54
ChkaO54804 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ChkaO54804 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ChkaO54804 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ChkaO54804 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
ChkaO54804 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ChkaO54804 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ChkaO54804 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
ChkaO54804 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.44■□□□□ 0.54
ChkaO54804 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
ChkaO54804 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ChkaO54804 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
ChkaO54804 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
ChkaO54804 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.43■□□□□ 0.54
ChkaO54804 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ChkaO54804 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ChkaO54804 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.43■□□□□ 0.54
ChkaO54804 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ChkaO54804 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ChkaO54804 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ChkaO54804 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
ChkaO54804 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
ChkaO54804 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
ChkaO54804 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ChkaO54804 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
ChkaO54804 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms