Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Limk2O54785 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Limk2O54785 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Limk2O54785 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Limk2O54785 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Limk2O54785 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Limk2O54785 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Limk2O54785 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Limk2O54785 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Limk2O54785 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC18.61■□□□□ 0.57
Limk2O54785 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Limk2O54785 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC18.61■□□□□ 0.57
Limk2O54785 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC18.61■□□□□ 0.57
Limk2O54785 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC18.61■□□□□ 0.57
Limk2O54785 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.61■□□□□ 0.57
Limk2O54785 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Limk2O54785 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Limk2O54785 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Limk2O54785 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.61■□□□□ 0.57
Limk2O54785 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Limk2O54785 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Limk2O54785 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Limk2O54785 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Limk2O54785 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Limk2O54785 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Limk2O54785 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Limk2O54785 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
Limk2O54785 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Limk2O54785 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.6■□□□□ 0.57
Limk2O54785 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Limk2O54785 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Limk2O54785 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Limk2O54785 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Limk2O54785 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Limk2O54785 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Limk2O54785 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Limk2O54785 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
Limk2O54785 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Limk2O54785 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Limk2O54785 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Limk2O54785 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
Limk2O54785 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
Limk2O54785 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Limk2O54785 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Limk2O54785 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Limk2O54785 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Limk2O54785 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Limk2O54785 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Limk2O54785 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Limk2O54785 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Limk2O54785 Gm13509-201ENSMUST00000119733 1308 ntBASIC18.58■□□□□ 0.57
Limk2O54785 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
Limk2O54785 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Limk2O54785 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Limk2O54785 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Limk2O54785 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.58■□□□□ 0.56
Limk2O54785 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.58■□□□□ 0.56
Limk2O54785 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Limk2O54785 Trmt13-210ENSMUST00000198454 880 ntBASIC18.58■□□□□ 0.56
Limk2O54785 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Limk2O54785 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Limk2O54785 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Limk2O54785 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Limk2O54785 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Limk2O54785 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Limk2O54785 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Limk2O54785 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC18.57■□□□□ 0.56
Limk2O54785 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Limk2O54785 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC18.57■□□□□ 0.56
Limk2O54785 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Limk2O54785 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.57■□□□□ 0.56
Limk2O54785 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Limk2O54785 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Limk2O54785 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Limk2O54785 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Limk2O54785 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC18.56■□□□□ 0.56
Limk2O54785 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC18.56■□□□□ 0.56
Limk2O54785 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Limk2O54785 Gm44878-201ENSMUST00000205812 1295 ntBASIC18.56■□□□□ 0.56
Limk2O54785 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Limk2O54785 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Limk2O54785 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Limk2O54785 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Limk2O54785 Gm9194-201ENSMUST00000220749 1447 ntBASIC18.56■□□□□ 0.56
Limk2O54785 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.56■□□□□ 0.56
Limk2O54785 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.56■□□□□ 0.56
Limk2O54785 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
Limk2O54785 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Limk2O54785 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Limk2O54785 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Limk2O54785 Gm37563-201ENSMUST00000192580 1513 ntBASIC18.55■□□□□ 0.56
Limk2O54785 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Limk2O54785 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Limk2O54785 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC18.55■□□□□ 0.56
Limk2O54785 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.55■□□□□ 0.56
Limk2O54785 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Limk2O54785 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Limk2O54785 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Limk2O54785 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Limk2O54785 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC18.54■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 184.1 ms