Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC19.71■□□□□ 0.75
Nr1i3O35627 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nr1i3O35627 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1i3O35627 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Nr1i3O35627 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1i3O35627 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1i3O35627 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Nr1i3O35627 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1i3O35627 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Nr1i3O35627 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1i3O35627 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1i3O35627 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1i3O35627 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1i3O35627 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1i3O35627 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
Nr1i3O35627 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1i3O35627 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1i3O35627 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1i3O35627 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Nr1i3O35627 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.69■□□□□ 0.74
Nr1i3O35627 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1i3O35627 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1i3O35627 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1i3O35627 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Nr1i3O35627 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1i3O35627 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1i3O35627 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC19.69■□□□□ 0.74
Nr1i3O35627 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1i3O35627 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1i3O35627 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1i3O35627 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC19.69■□□□□ 0.74
Nr1i3O35627 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1i3O35627 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1i3O35627 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1i3O35627 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
Nr1i3O35627 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Nr1i3O35627 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Nr1i3O35627 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1i3O35627 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1i3O35627 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1i3O35627 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1i3O35627 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1i3O35627 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1i3O35627 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1i3O35627 Gm22325-201ENSMUST00000158904 308 ntBASIC19.68■□□□□ 0.74
Nr1i3O35627 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.68■□□□□ 0.74
Nr1i3O35627 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1i3O35627 Gm10493-201ENSMUST00000097270 612 ntBASIC19.68■□□□□ 0.74
Nr1i3O35627 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1i3O35627 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1i3O35627 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1i3O35627 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Nr1i3O35627 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Nr1i3O35627 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Nr1i3O35627 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC19.68■□□□□ 0.74
Nr1i3O35627 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1i3O35627 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1i3O35627 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1i3O35627 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Nr1i3O35627 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1i3O35627 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC19.67■□□□□ 0.74
Nr1i3O35627 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Nr1i3O35627 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Nr1i3O35627 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1i3O35627 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Nr1i3O35627 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.67■□□□□ 0.74
Nr1i3O35627 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1i3O35627 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1i3O35627 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1i3O35627 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.66■□□□□ 0.74
Nr1i3O35627 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.66■□□□□ 0.74
Nr1i3O35627 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.66■□□□□ 0.74
Nr1i3O35627 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1i3O35627 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC19.66■□□□□ 0.74
Nr1i3O35627 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC19.66■□□□□ 0.74
Nr1i3O35627 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1i3O35627 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1i3O35627 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1i3O35627 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1i3O35627 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Nr1i3O35627 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC19.66■□□□□ 0.74
Nr1i3O35627 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1i3O35627 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1i3O35627 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.65■□□□□ 0.74
Nr1i3O35627 Fst-202ENSMUST00000223640 2612 ntBASIC19.65■□□□□ 0.74
Nr1i3O35627 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1i3O35627 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Nr1i3O35627 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC19.65■□□□□ 0.74
Nr1i3O35627 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1i3O35627 Gm42778-201ENSMUST00000199644 553 ntBASIC19.65■□□□□ 0.74
Nr1i3O35627 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1i3O35627 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1i3O35627 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1i3O35627 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Nr1i3O35627 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Nr1i3O35627 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Nr1i3O35627 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Nr1i3O35627 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nr1i3O35627 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Nr1i3O35627 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms