Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk3O35492 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Clk3O35492 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk3O35492 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Clk3O35492 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC17.43■□□□□ 0.38
Clk3O35492 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clk3O35492 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clk3O35492 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk3O35492 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.42■□□□□ 0.38
Clk3O35492 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk3O35492 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.42■□□□□ 0.38
Clk3O35492 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC17.42■□□□□ 0.38
Clk3O35492 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC17.42■□□□□ 0.38
Clk3O35492 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk3O35492 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk3O35492 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clk3O35492 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk3O35492 Gm10129-202ENSMUST00000193100 1316 ntBASIC17.42■□□□□ 0.38
Clk3O35492 AC123834.2-201ENSMUST00000224038 2340 ntBASIC17.42■□□□□ 0.38
Clk3O35492 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk3O35492 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clk3O35492 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC17.41■□□□□ 0.38
Clk3O35492 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Clk3O35492 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk3O35492 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clk3O35492 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.41■□□□□ 0.38
Clk3O35492 Gp5-201ENSMUST00000061190 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk3O35492 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk3O35492 AC099934.2-201ENSMUST00000196389 70 ntBASIC17.41■□□□□ 0.38
Clk3O35492 AC156953.1-201ENSMUST00000196953 70 ntBASIC17.41■□□□□ 0.38
Clk3O35492 AC157822.2-201ENSMUST00000200291 70 ntBASIC17.41■□□□□ 0.38
Clk3O35492 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk3O35492 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk3O35492 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk3O35492 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk3O35492 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC17.41■□□□□ 0.38
Clk3O35492 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Clk3O35492 Gm42922-201ENSMUST00000195887 2078 ntBASIC17.41■□□□□ 0.38
Clk3O35492 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Clk3O35492 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk3O35492 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Clk3O35492 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Clk3O35492 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk3O35492 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk3O35492 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Clk3O35492 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Clk3O35492 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk3O35492 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk3O35492 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk3O35492 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk3O35492 CT030146.1-201ENSMUST00000220919 217 ntBASIC17.4■□□□□ 0.38
Clk3O35492 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
Clk3O35492 Gm5874-201ENSMUST00000096101 508 ntBASIC17.4■□□□□ 0.38
Clk3O35492 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk3O35492 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk3O35492 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Clk3O35492 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.4■□□□□ 0.38
Clk3O35492 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk3O35492 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Clk3O35492 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC17.4■□□□□ 0.38
Clk3O35492 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
Clk3O35492 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk3O35492 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk3O35492 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk3O35492 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk3O35492 Gm7860-201ENSMUST00000121190 879 ntBASIC17.39■□□□□ 0.37
Clk3O35492 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clk3O35492 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk3O35492 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Clk3O35492 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clk3O35492 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk3O35492 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk3O35492 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Clk3O35492 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk3O35492 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk3O35492 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Clk3O35492 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clk3O35492 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk3O35492 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clk3O35492 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk3O35492 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clk3O35492 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk3O35492 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
Clk3O35492 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Clk3O35492 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.38■□□□□ 0.37
Clk3O35492 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk3O35492 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC17.38■□□□□ 0.37
Clk3O35492 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk3O35492 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Clk3O35492 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC17.38■□□□□ 0.37
Clk3O35492 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk3O35492 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
Clk3O35492 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk3O35492 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk3O35492 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Clk3O35492 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clk3O35492 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Clk3O35492 Gm37811-201ENSMUST00000192416 2601 ntBASIC17.37■□□□□ 0.37
Clk3O35492 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC17.37■□□□□ 0.37
Clk3O35492 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms