Protein–RNA interactions for Protein: O35393

Efnb3, Ephrin-B3, mousemouse

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Efnb3O35393 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Efnb3O35393 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Efnb3O35393 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
Efnb3O35393 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Efnb3O35393 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Efnb3O35393 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC14.46□□□□□ -0.09
Efnb3O35393 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Efnb3O35393 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.46□□□□□ -0.09
Efnb3O35393 Zfp36l1-204ENSMUST00000219642 545 ntTSL 3 BASIC14.46□□□□□ -0.09
Efnb3O35393 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Efnb3O35393 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Efnb3O35393 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Efnb3O35393 Gpr137-203ENSMUST00000099776 1569 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Efnb3O35393 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Efnb3O35393 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Efnb3O35393 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Efnb3O35393 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Efnb3O35393 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Efnb3O35393 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Efnb3O35393 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Efnb3O35393 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Efnb3O35393 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Efnb3O35393 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Efnb3O35393 Gm43137-201ENSMUST00000198052 594 ntBASIC14.45□□□□□ -0.1
Efnb3O35393 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC14.45□□□□□ -0.1
Efnb3O35393 Fst-202ENSMUST00000223640 2612 ntBASIC14.45□□□□□ -0.1
Efnb3O35393 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Efnb3O35393 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Efnb3O35393 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Efnb3O35393 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Efnb3O35393 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Efnb3O35393 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Efnb3O35393 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Efnb3O35393 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
Efnb3O35393 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Efnb3O35393 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Efnb3O35393 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Efnb3O35393 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 Gm27454-201ENSMUST00000185090 204 ntBASIC14.44□□□□□ -0.1
Efnb3O35393 Rfxap-204ENSMUST00000217267 696 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Efnb3O35393 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
Efnb3O35393 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Efnb3O35393 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC14.43□□□□□ -0.1
Efnb3O35393 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Efnb3O35393 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Efnb3O35393 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Efnb3O35393 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.43□□□□□ -0.1
Efnb3O35393 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Efnb3O35393 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Efnb3O35393 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Efnb3O35393 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Efnb3O35393 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Efnb3O35393 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Efnb3O35393 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Efnb3O35393 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC14.43□□□□□ -0.1
Efnb3O35393 Fcho2-208ENSMUST00000224992 2964 ntBASIC14.43□□□□□ -0.1
Efnb3O35393 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Efnb3O35393 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Efnb3O35393 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Efnb3O35393 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Efnb3O35393 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Efnb3O35393 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Efnb3O35393 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Efnb3O35393 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Efnb3O35393 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Efnb3O35393 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Efnb3O35393 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Efnb3O35393 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC14.42□□□□□ -0.1
Efnb3O35393 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Efnb3O35393 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms