Protein–RNA interactions for Protein: O35305

Tnfrsf11a, Tumor necrosis factor receptor superfamily member 11A, mousemouse

Predictions only

Length 625 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11aO35305 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tnfrsf11aO35305 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Tnfrsf11aO35305 Gm26524-201ENSMUST00000192339 390 ntBASIC19.77■□□□□ 0.76
Tnfrsf11aO35305 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Tnfrsf11aO35305 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tnfrsf11aO35305 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tnfrsf11aO35305 Gm10602-201ENSMUST00000098239 609 ntBASIC19.77■□□□□ 0.76
Tnfrsf11aO35305 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Tnfrsf11aO35305 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Tnfrsf11aO35305 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Tnfrsf11aO35305 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.76■□□□□ 0.75
Tnfrsf11aO35305 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC19.76■□□□□ 0.75
Tnfrsf11aO35305 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Tnfrsf11aO35305 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf11aO35305 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf11aO35305 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf11aO35305 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC19.76■□□□□ 0.75
Tnfrsf11aO35305 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC19.76■□□□□ 0.75
Tnfrsf11aO35305 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf11aO35305 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf11aO35305 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf11aO35305 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf11aO35305 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf11aO35305 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf11aO35305 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC19.76■□□□□ 0.75
Tnfrsf11aO35305 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Tnfrsf11aO35305 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Tnfrsf11aO35305 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf11aO35305 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf11aO35305 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf11aO35305 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf11aO35305 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Tnfrsf11aO35305 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Tnfrsf11aO35305 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf11aO35305 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf11aO35305 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf11aO35305 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf11aO35305 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf11aO35305 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf11aO35305 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf11aO35305 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Tnfrsf11aO35305 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf11aO35305 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf11aO35305 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf11aO35305 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf11aO35305 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Tnfrsf11aO35305 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf11aO35305 Gm22325-201ENSMUST00000158904 308 ntBASIC19.74■□□□□ 0.75
Tnfrsf11aO35305 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.74■□□□□ 0.75
Tnfrsf11aO35305 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Tnfrsf11aO35305 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf11aO35305 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Tnfrsf11aO35305 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Tnfrsf11aO35305 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf11aO35305 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf11aO35305 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Tnfrsf11aO35305 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC19.74■□□□□ 0.75
Tnfrsf11aO35305 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf11aO35305 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf11aO35305 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.73■□□□□ 0.75
Tnfrsf11aO35305 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf11aO35305 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.73■□□□□ 0.75
Tnfrsf11aO35305 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.73■□□□□ 0.75
Tnfrsf11aO35305 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf11aO35305 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf11aO35305 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Tnfrsf11aO35305 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC19.73■□□□□ 0.75
Tnfrsf11aO35305 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11aO35305 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11aO35305 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11aO35305 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC19.72■□□□□ 0.75
Tnfrsf11aO35305 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11aO35305 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11aO35305 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11aO35305 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11aO35305 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
Tnfrsf11aO35305 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11aO35305 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11aO35305 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC19.72■□□□□ 0.75
Tnfrsf11aO35305 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11aO35305 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11aO35305 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11aO35305 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11aO35305 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11aO35305 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Tnfrsf11aO35305 Grk6-206ENSMUST00000224995 2971 ntBASIC19.71■□□□□ 0.75
Tnfrsf11aO35305 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Tnfrsf11aO35305 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf11aO35305 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf11aO35305 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf11aO35305 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf11aO35305 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Tnfrsf11aO35305 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Tnfrsf11aO35305 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Tnfrsf11aO35305 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf11aO35305 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf11aO35305 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Tnfrsf11aO35305 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Tnfrsf11aO35305 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Tnfrsf11aO35305 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms