Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC23.68■■□□□ 1.38
Col15a1O35206 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
Col15a1O35206 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col15a1O35206 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col15a1O35206 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col15a1O35206 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col15a1O35206 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC23.68■■□□□ 1.38
Col15a1O35206 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col15a1O35206 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Col15a1O35206 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
Col15a1O35206 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC23.68■■□□□ 1.38
Col15a1O35206 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
Col15a1O35206 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Col15a1O35206 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Col15a1O35206 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC23.67■■□□□ 1.38
Col15a1O35206 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Col15a1O35206 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC23.67■■□□□ 1.38
Col15a1O35206 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col15a1O35206 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Col15a1O35206 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col15a1O35206 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col15a1O35206 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col15a1O35206 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC23.67■■□□□ 1.38
Col15a1O35206 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col15a1O35206 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col15a1O35206 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Col15a1O35206 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
Col15a1O35206 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col15a1O35206 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC23.66■■□□□ 1.38
Col15a1O35206 Mir2861-201ENSMUST00000175539 82 ntBASIC23.66■■□□□ 1.38
Col15a1O35206 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col15a1O35206 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
Col15a1O35206 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC23.66■■□□□ 1.38
Col15a1O35206 R3hdm4-201ENSMUST00000045628 1898 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col15a1O35206 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
Col15a1O35206 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col15a1O35206 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Col15a1O35206 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC23.65■■□□□ 1.38
Col15a1O35206 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC23.65■■□□□ 1.38
Col15a1O35206 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
Col15a1O35206 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col15a1O35206 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Col15a1O35206 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Col15a1O35206 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col15a1O35206 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC23.65■■□□□ 1.38
Col15a1O35206 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC23.65■■□□□ 1.38
Col15a1O35206 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col15a1O35206 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col15a1O35206 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
Col15a1O35206 Gm10819-201ENSMUST00000099988 561 ntBASIC23.65■■□□□ 1.38
Col15a1O35206 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.38
Col15a1O35206 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
Col15a1O35206 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC23.64■■□□□ 1.37
Col15a1O35206 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
Col15a1O35206 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC23.64■■□□□ 1.37
Col15a1O35206 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC23.64■■□□□ 1.37
Col15a1O35206 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC23.64■■□□□ 1.37
Col15a1O35206 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col15a1O35206 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col15a1O35206 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Col15a1O35206 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Col15a1O35206 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col15a1O35206 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Col15a1O35206 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col15a1O35206 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col15a1O35206 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC23.63■■□□□ 1.37
Col15a1O35206 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC23.63■■□□□ 1.37
Col15a1O35206 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC23.63■■□□□ 1.37
Col15a1O35206 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col15a1O35206 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC23.63■■□□□ 1.37
Col15a1O35206 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC23.63■■□□□ 1.37
Col15a1O35206 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col15a1O35206 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
Col15a1O35206 Gm15853-202ENSMUST00000195518 2041 ntBASIC23.62■■□□□ 1.37
Col15a1O35206 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC23.62■■□□□ 1.37
Col15a1O35206 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col15a1O35206 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC23.62■■□□□ 1.37
Col15a1O35206 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col15a1O35206 Qdpr-208ENSMUST00000197946 1206 ntTSL 5 BASIC23.62■■□□□ 1.37
Col15a1O35206 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC23.62■■□□□ 1.37
Col15a1O35206 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col15a1O35206 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC23.62■■□□□ 1.37
Col15a1O35206 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col15a1O35206 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col15a1O35206 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col15a1O35206 Gm10459-201ENSMUST00000202708 1155 ntBASIC23.61■■□□□ 1.37
Col15a1O35206 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col15a1O35206 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Col15a1O35206 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC23.6■■□□□ 1.37
Col15a1O35206 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
Col15a1O35206 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
Col15a1O35206 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC23.6■■□□□ 1.37
Col15a1O35206 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Col15a1O35206 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Col15a1O35206 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Col15a1O35206 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Col15a1O35206 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col15a1O35206 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Col15a1O35206 Gm21362-201ENSMUST00000194272 928 ntBASIC23.59■■□□□ 1.37
Col15a1O35206 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms