Protein–RNA interactions for Protein: O09173

Hgd, Homogentisate 1,2-dioxygenase, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HgdO09173 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HgdO09173 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
HgdO09173 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HgdO09173 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HgdO09173 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC17.56■□□□□ 0.4
HgdO09173 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
HgdO09173 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HgdO09173 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HgdO09173 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
HgdO09173 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC17.55■□□□□ 0.4
HgdO09173 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HgdO09173 Nexmif-201ENSMUST00000056502 5211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HgdO09173 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
HgdO09173 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HgdO09173 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HgdO09173 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
HgdO09173 Gm8309-201ENSMUST00000206627 1448 ntBASIC17.55■□□□□ 0.4
HgdO09173 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
HgdO09173 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
HgdO09173 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC17.54■□□□□ 0.4
HgdO09173 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC17.54■□□□□ 0.4
HgdO09173 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
HgdO09173 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HgdO09173 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.54■□□□□ 0.4
HgdO09173 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC17.54■□□□□ 0.4
HgdO09173 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
HgdO09173 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC17.54■□□□□ 0.4
HgdO09173 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HgdO09173 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HgdO09173 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HgdO09173 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC17.54■□□□□ 0.4
HgdO09173 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HgdO09173 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HgdO09173 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HgdO09173 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
HgdO09173 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
HgdO09173 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
HgdO09173 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
HgdO09173 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HgdO09173 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HgdO09173 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HgdO09173 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HgdO09173 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.53■□□□□ 0.4
HgdO09173 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC17.53■□□□□ 0.4
HgdO09173 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.53■□□□□ 0.4
HgdO09173 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
HgdO09173 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HgdO09173 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
HgdO09173 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
HgdO09173 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HgdO09173 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HgdO09173 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
HgdO09173 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
HgdO09173 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HgdO09173 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
HgdO09173 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HgdO09173 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC17.52■□□□□ 0.4
HgdO09173 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC17.52■□□□□ 0.4
HgdO09173 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HgdO09173 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
HgdO09173 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
HgdO09173 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
HgdO09173 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HgdO09173 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HgdO09173 Gm12669-201ENSMUST00000122162 1009 ntBASIC17.51■□□□□ 0.39
HgdO09173 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC17.51■□□□□ 0.39
HgdO09173 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC17.51■□□□□ 0.39
HgdO09173 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HgdO09173 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.51■□□□□ 0.39
HgdO09173 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HgdO09173 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HgdO09173 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HgdO09173 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HgdO09173 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HgdO09173 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
HgdO09173 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
HgdO09173 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HgdO09173 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HgdO09173 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HgdO09173 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.5■□□□□ 0.39
HgdO09173 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HgdO09173 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HgdO09173 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HgdO09173 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.5■□□□□ 0.39
HgdO09173 Gm44672-201ENSMUST00000206944 1098 ntBASIC17.5■□□□□ 0.39
HgdO09173 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HgdO09173 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
HgdO09173 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HgdO09173 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC17.5■□□□□ 0.39
HgdO09173 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HgdO09173 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
HgdO09173 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HgdO09173 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HgdO09173 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HgdO09173 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
HgdO09173 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
HgdO09173 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
HgdO09173 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.49■□□□□ 0.39
HgdO09173 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
HgdO09173 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms