Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf11bO08712 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC18.64■□□□□ 0.57
Tnfrsf11bO08712 Dmtn-207ENSMUST00000228001 2437 ntBASIC18.64■□□□□ 0.57
Tnfrsf11bO08712 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
Tnfrsf11bO08712 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf11bO08712 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tnfrsf11bO08712 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf11bO08712 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf11bO08712 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.63■□□□□ 0.57
Tnfrsf11bO08712 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf11bO08712 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
Tnfrsf11bO08712 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.63■□□□□ 0.57
Tnfrsf11bO08712 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf11bO08712 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Tnfrsf11bO08712 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.63■□□□□ 0.57
Tnfrsf11bO08712 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.63■□□□□ 0.57
Tnfrsf11bO08712 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf11bO08712 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tnfrsf11bO08712 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.62■□□□□ 0.57
Tnfrsf11bO08712 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf11bO08712 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf11bO08712 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf11bO08712 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf11bO08712 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf11bO08712 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Tnfrsf11bO08712 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf11bO08712 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf11bO08712 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tnfrsf11bO08712 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11bO08712 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11bO08712 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11bO08712 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11bO08712 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11bO08712 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC18.61■□□□□ 0.57
Tnfrsf11bO08712 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11bO08712 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11bO08712 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC18.61■□□□□ 0.57
Tnfrsf11bO08712 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tnfrsf11bO08712 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.6■□□□□ 0.57
Tnfrsf11bO08712 AC121961.1-201ENSMUST00000218594 1779 ntBASIC18.6■□□□□ 0.57
Tnfrsf11bO08712 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf11bO08712 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf11bO08712 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf11bO08712 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf11bO08712 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf11bO08712 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf11bO08712 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf11bO08712 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf11bO08712 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tnfrsf11bO08712 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Tnfrsf11bO08712 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tnfrsf11bO08712 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Tnfrsf11bO08712 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Tnfrsf11bO08712 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf11bO08712 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf11bO08712 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf11bO08712 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Tnfrsf11bO08712 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11bO08712 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11bO08712 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Tnfrsf11bO08712 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11bO08712 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11bO08712 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC18.57■□□□□ 0.56
Tnfrsf11bO08712 Gm42778-201ENSMUST00000199644 553 ntBASIC18.57■□□□□ 0.56
Tnfrsf11bO08712 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.57■□□□□ 0.56
Tnfrsf11bO08712 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Tnfrsf11bO08712 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11bO08712 AC131586.2-201ENSMUST00000228370 1512 ntBASIC18.57■□□□□ 0.56
Tnfrsf11bO08712 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.57■□□□□ 0.56
Tnfrsf11bO08712 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11bO08712 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11bO08712 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Tnfrsf11bO08712 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Tnfrsf11bO08712 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11bO08712 Gm10655-201ENSMUST00000098658 1397 ntBASIC18.56■□□□□ 0.56
Tnfrsf11bO08712 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Tnfrsf11bO08712 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Tnfrsf11bO08712 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms