Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13d-3J3QMG8 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13d-3J3QMG8 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13d-3J3QMG8 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav13d-3J3QMG8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13d-3J3QMG8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13d-3J3QMG8 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13d-3J3QMG8 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC16.1■□□□□ 0.17
Trav13d-3J3QMG8 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13d-3J3QMG8 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13d-3J3QMG8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
Trav13d-3J3QMG8 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
Trav13d-3J3QMG8 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13d-3J3QMG8 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13d-3J3QMG8 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.1■□□□□ 0.17
Trav13d-3J3QMG8 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13d-3J3QMG8 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13d-3J3QMG8 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav13d-3J3QMG8 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.1■□□□□ 0.17
Trav13d-3J3QMG8 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-3J3QMG8 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.09■□□□□ 0.17
Trav13d-3J3QMG8 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-3J3QMG8 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav13d-3J3QMG8 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav13d-3J3QMG8 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC16.09■□□□□ 0.17
Trav13d-3J3QMG8 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-3J3QMG8 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav13d-3J3QMG8 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-3J3QMG8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-3J3QMG8 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-3J3QMG8 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-3J3QMG8 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.09■□□□□ 0.17
Trav13d-3J3QMG8 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-3J3QMG8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-3J3QMG8 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav13d-3J3QMG8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav13d-3J3QMG8 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.09■□□□□ 0.17
Trav13d-3J3QMG8 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
Trav13d-3J3QMG8 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13d-3J3QMG8 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC16.08■□□□□ 0.16
Trav13d-3J3QMG8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13d-3J3QMG8 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13d-3J3QMG8 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13d-3J3QMG8 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13d-3J3QMG8 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13d-3J3QMG8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13d-3J3QMG8 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.08■□□□□ 0.16
Trav13d-3J3QMG8 Gm7291-201ENSMUST00000199147 382 ntBASIC16.08■□□□□ 0.16
Trav13d-3J3QMG8 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13d-3J3QMG8 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13d-3J3QMG8 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13d-3J3QMG8 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13d-3J3QMG8 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13d-3J3QMG8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
Trav13d-3J3QMG8 AC121961.1-201ENSMUST00000218594 1779 ntBASIC16.08■□□□□ 0.16
Trav13d-3J3QMG8 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13d-3J3QMG8 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav13d-3J3QMG8 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-3J3QMG8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-3J3QMG8 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-3J3QMG8 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-3J3QMG8 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-3J3QMG8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-3J3QMG8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav13d-3J3QMG8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-3J3QMG8 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-3J3QMG8 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav13d-3J3QMG8 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-3J3QMG8 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-3J3QMG8 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
Trav13d-3J3QMG8 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-3J3QMG8 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav13d-3J3QMG8 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Gm13509-201ENSMUST00000119733 1308 ntBASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Gm22325-201ENSMUST00000158904 308 ntBASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav13d-3J3QMG8 Anks1b-225ENSMUST00000182966 1625 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav13d-3J3QMG8 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13d-3J3QMG8 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Trav13d-3J3QMG8 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.05■□□□□ 0.16
Trav13d-3J3QMG8 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav13d-3J3QMG8 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.05■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms