Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Nkx1-1G3UXB3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Nkx1-1G3UXB3 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
Nkx1-1G3UXB3 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx1-1G3UXB3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC20.82■□□□□ 0.92
Nkx1-1G3UXB3 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
Nkx1-1G3UXB3 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx1-1G3UXB3 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx1-1G3UXB3 Gm13884-201ENSMUST00000118103 829 ntBASIC20.82■□□□□ 0.92
Nkx1-1G3UXB3 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx1-1G3UXB3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx1-1G3UXB3 Gm2213-201ENSMUST00000197485 688 ntBASIC20.82■□□□□ 0.92
Nkx1-1G3UXB3 Gm18377-201ENSMUST00000215141 607 ntBASIC20.82■□□□□ 0.92
Nkx1-1G3UXB3 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nkx1-1G3UXB3 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Nkx1-1G3UXB3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx1-1G3UXB3 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx1-1G3UXB3 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx1-1G3UXB3 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx1-1G3UXB3 Gm26827-201ENSMUST00000181911 148 ntTSL 5 BASIC20.81■□□□□ 0.92
Nkx1-1G3UXB3 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC20.81■□□□□ 0.92
Nkx1-1G3UXB3 Gm34391-201ENSMUST00000203706 907 ntBASIC20.81■□□□□ 0.92
Nkx1-1G3UXB3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC20.81■□□□□ 0.92
Nkx1-1G3UXB3 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC20.81■□□□□ 0.92
Nkx1-1G3UXB3 Gm21559-201ENSMUST00000220638 855 ntBASIC20.81■□□□□ 0.92
Nkx1-1G3UXB3 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nkx1-1G3UXB3 Gm8587-201ENSMUST00000076538 843 ntBASIC20.81■□□□□ 0.92
Nkx1-1G3UXB3 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
Nkx1-1G3UXB3 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC20.8■□□□□ 0.92
Nkx1-1G3UXB3 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-1G3UXB3 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-1G3UXB3 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.8■□□□□ 0.92
Nkx1-1G3UXB3 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-1G3UXB3 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-1G3UXB3 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-1G3UXB3 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-1G3UXB3 Gm7370-201ENSMUST00000219471 767 ntBASIC20.8■□□□□ 0.92
Nkx1-1G3UXB3 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC20.8■□□□□ 0.92
Nkx1-1G3UXB3 Otx2os1-206ENSMUST00000228153 787 ntBASIC20.8■□□□□ 0.92
Nkx1-1G3UXB3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-1G3UXB3 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-1G3UXB3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-1G3UXB3 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Nkx1-1G3UXB3 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx1-1G3UXB3 Ncmap-201ENSMUST00000064481 1448 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
Nkx1-1G3UXB3 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx1-1G3UXB3 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx1-1G3UXB3 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Nkx1-1G3UXB3 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
Nkx1-1G3UXB3 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx1-1G3UXB3 Gm27357-201ENSMUST00000183754 135 ntBASIC20.79■□□□□ 0.92
Nkx1-1G3UXB3 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC20.79■□□□□ 0.92
Nkx1-1G3UXB3 AC159246.1-201ENSMUST00000214478 249 ntBASIC20.79■□□□□ 0.92
Nkx1-1G3UXB3 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC20.79■□□□□ 0.92
Nkx1-1G3UXB3 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx1-1G3UXB3 Birc2-201ENSMUST00000054878 378 ntBASIC20.79■□□□□ 0.92
Nkx1-1G3UXB3 Rnase9-201ENSMUST00000064214 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx1-1G3UXB3 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC20.79■□□□□ 0.92
Nkx1-1G3UXB3 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx1-1G3UXB3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nkx1-1G3UXB3 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx1-1G3UXB3 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Nkx1-1G3UXB3 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx1-1G3UXB3 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC20.78■□□□□ 0.92
Nkx1-1G3UXB3 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC20.78■□□□□ 0.92
Nkx1-1G3UXB3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx1-1G3UXB3 Gm5083-202ENSMUST00000163056 1204 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx1-1G3UXB3 Gm38285-201ENSMUST00000192928 922 ntBASIC20.78■□□□□ 0.92
Nkx1-1G3UXB3 Gm43553-201ENSMUST00000200900 685 ntBASIC20.78■□□□□ 0.92
Nkx1-1G3UXB3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx1-1G3UXB3 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx1-1G3UXB3 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx1-1G3UXB3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx1-1G3UXB3 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx1-1G3UXB3 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Nkx1-1G3UXB3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Nkx1-1G3UXB3 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx1-1G3UXB3 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx1-1G3UXB3 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx1-1G3UXB3 Gm12962-202ENSMUST00000144212 691 ntTSL 2 BASIC20.77■□□□□ 0.92
Nkx1-1G3UXB3 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx1-1G3UXB3 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Nkx1-1G3UXB3 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
Nkx1-1G3UXB3 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx1-1G3UXB3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
Nkx1-1G3UXB3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx1-1G3UXB3 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx1-1G3UXB3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nkx1-1G3UXB3 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC20.77■□□□□ 0.91
Nkx1-1G3UXB3 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Nkx1-1G3UXB3 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx1-1G3UXB3 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx1-1G3UXB3 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC20.76■□□□□ 0.91
Nkx1-1G3UXB3 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx1-1G3UXB3 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Nkx1-1G3UXB3 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nkx1-1G3UXB3 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.76■□□□□ 0.91
Nkx1-1G3UXB3 Gm29644-201ENSMUST00000189003 1341 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Nkx1-1G3UXB3 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Nkx1-1G3UXB3 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms