Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
Pcdh9F8VPK8 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh9F8VPK8 Gm45606-201ENSMUST00000209836 2795 ntBASIC18.79■□□□□ 0.6
Pcdh9F8VPK8 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh9F8VPK8 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdh9F8VPK8 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdh9F8VPK8 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.79■□□□□ 0.6
Pcdh9F8VPK8 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh9F8VPK8 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcdh9F8VPK8 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Pcdh9F8VPK8 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Pcdh9F8VPK8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh9F8VPK8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC18.79■□□□□ 0.6
Pcdh9F8VPK8 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh9F8VPK8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh9F8VPK8 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pcdh9F8VPK8 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pcdh9F8VPK8 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh9F8VPK8 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh9F8VPK8 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh9F8VPK8 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC18.77■□□□□ 0.6
Pcdh9F8VPK8 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.77■□□□□ 0.6
Pcdh9F8VPK8 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pcdh9F8VPK8 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Pcdh9F8VPK8 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh9F8VPK8 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh9F8VPK8 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh9F8VPK8 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC18.76■□□□□ 0.59
Pcdh9F8VPK8 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh9F8VPK8 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh9F8VPK8 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Pcdh9F8VPK8 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Pcdh9F8VPK8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC18.76■□□□□ 0.59
Pcdh9F8VPK8 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC18.76■□□□□ 0.59
Pcdh9F8VPK8 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh9F8VPK8 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh9F8VPK8 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh9F8VPK8 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh9F8VPK8 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh9F8VPK8 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Pcdh9F8VPK8 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC18.75■□□□□ 0.59
Pcdh9F8VPK8 Gm10129-202ENSMUST00000193100 1316 ntBASIC18.75■□□□□ 0.59
Pcdh9F8VPK8 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Pcdh9F8VPK8 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Pcdh9F8VPK8 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh9F8VPK8 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Pcdh9F8VPK8 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh9F8VPK8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh9F8VPK8 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh9F8VPK8 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh9F8VPK8 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh9F8VPK8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh9F8VPK8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.75■□□□□ 0.59
Pcdh9F8VPK8 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh9F8VPK8 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Pcdh9F8VPK8 Fst-202ENSMUST00000223640 2612 ntBASIC18.75■□□□□ 0.59
Pcdh9F8VPK8 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 Gm15039-201ENSMUST00000118914 875 ntBASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 Gm10493-201ENSMUST00000097270 612 ntBASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Pcdh9F8VPK8 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Pcdh9F8VPK8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms