Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC18.81■□□□□ 0.6
Atf6F6VAN0 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf6F6VAN0 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Atf6F6VAN0 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atf6F6VAN0 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Atf6F6VAN0 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atf6F6VAN0 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf6F6VAN0 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atf6F6VAN0 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.8■□□□□ 0.6
Atf6F6VAN0 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf6F6VAN0 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf6F6VAN0 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf6F6VAN0 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atf6F6VAN0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
Atf6F6VAN0 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Atf6F6VAN0 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.79■□□□□ 0.6
Atf6F6VAN0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atf6F6VAN0 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atf6F6VAN0 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atf6F6VAN0 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Atf6F6VAN0 AC160393.1-201ENSMUST00000218378 1279 ntBASIC18.79■□□□□ 0.6
Atf6F6VAN0 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.79■□□□□ 0.6
Atf6F6VAN0 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atf6F6VAN0 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC18.79■□□□□ 0.6
Atf6F6VAN0 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Atf6F6VAN0 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atf6F6VAN0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atf6F6VAN0 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Atf6F6VAN0 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf6F6VAN0 Il4i1-201ENSMUST00000033015 2048 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf6F6VAN0 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
Atf6F6VAN0 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf6F6VAN0 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf6F6VAN0 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Atf6F6VAN0 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.78■□□□□ 0.6
Atf6F6VAN0 Gm8495-201ENSMUST00000188740 694 ntBASIC18.78■□□□□ 0.6
Atf6F6VAN0 Gm42569-201ENSMUST00000200539 472 ntBASIC18.78■□□□□ 0.6
Atf6F6VAN0 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC18.78■□□□□ 0.6
Atf6F6VAN0 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf6F6VAN0 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Atf6F6VAN0 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Atf6F6VAN0 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf6F6VAN0 Akp3-201ENSMUST00000044878 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf6F6VAN0 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf6F6VAN0 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.78■□□□□ 0.6
Atf6F6VAN0 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.78■□□□□ 0.6
Atf6F6VAN0 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf6F6VAN0 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atf6F6VAN0 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Atf6F6VAN0 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf6F6VAN0 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf6F6VAN0 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.77■□□□□ 0.6
Atf6F6VAN0 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf6F6VAN0 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf6F6VAN0 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf6F6VAN0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf6F6VAN0 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.77■□□□□ 0.6
Atf6F6VAN0 Gm10849-201ENSMUST00000100397 618 ntBASIC18.77■□□□□ 0.6
Atf6F6VAN0 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC18.77■□□□□ 0.6
Atf6F6VAN0 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf6F6VAN0 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Atf6F6VAN0 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf6F6VAN0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Atf6F6VAN0 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
Atf6F6VAN0 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Atf6F6VAN0 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC18.77■□□□□ 0.59
Atf6F6VAN0 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Atf6F6VAN0 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Atf6F6VAN0 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf6F6VAN0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf6F6VAN0 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf6F6VAN0 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf6F6VAN0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.76■□□□□ 0.59
Atf6F6VAN0 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf6F6VAN0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf6F6VAN0 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC18.76■□□□□ 0.59
Atf6F6VAN0 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Atf6F6VAN0 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf6F6VAN0 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Atf6F6VAN0 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Atf6F6VAN0 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC18.75■□□□□ 0.59
Atf6F6VAN0 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Atf6F6VAN0 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.75■□□□□ 0.59
Atf6F6VAN0 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Atf6F6VAN0 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Atf6F6VAN0 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atf6F6VAN0 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Atf6F6VAN0 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Atf6F6VAN0 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.75■□□□□ 0.59
Atf6F6VAN0 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atf6F6VAN0 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atf6F6VAN0 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atf6F6VAN0 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atf6F6VAN0 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Atf6F6VAN0 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Atf6F6VAN0 Gm43672-201ENSMUST00000199072 1731 ntBASIC18.74■□□□□ 0.59
Atf6F6VAN0 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Atf6F6VAN0 Grk6-206ENSMUST00000224995 2971 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms