Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdhb9E9Q5G2 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Pcdhb9E9Q5G2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb9E9Q5G2 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb9E9Q5G2 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdhb9E9Q5G2 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb9E9Q5G2 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
Pcdhb9E9Q5G2 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb9E9Q5G2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb9E9Q5G2 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb9E9Q5G2 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb9E9Q5G2 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdhb9E9Q5G2 Gm9194-201ENSMUST00000220749 1447 ntBASIC21.63■■□□□ 1.05
Pcdhb9E9Q5G2 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb9E9Q5G2 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb9E9Q5G2 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb9E9Q5G2 Gm44878-201ENSMUST00000205812 1295 ntBASIC21.63■■□□□ 1.05
Pcdhb9E9Q5G2 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb9E9Q5G2 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb9E9Q5G2 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdhb9E9Q5G2 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.62■■□□□ 1.05
Pcdhb9E9Q5G2 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb9E9Q5G2 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb9E9Q5G2 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb9E9Q5G2 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb9E9Q5G2 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb9E9Q5G2 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb9E9Q5G2 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb9E9Q5G2 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb9E9Q5G2 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb9E9Q5G2 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb9E9Q5G2 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdhb9E9Q5G2 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb9E9Q5G2 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdhb9E9Q5G2 Flg-201ENSMUST00000050758 1488 ntBASIC21.61■■□□□ 1.05
Pcdhb9E9Q5G2 Gm11927-201ENSMUST00000118472 759 ntBASIC21.61■■□□□ 1.05
Pcdhb9E9Q5G2 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Pcdhb9E9Q5G2 AC121961.1-201ENSMUST00000218594 1779 ntBASIC21.61■■□□□ 1.05
Pcdhb9E9Q5G2 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
Pcdhb9E9Q5G2 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC21.6■■□□□ 1.05
Pcdhb9E9Q5G2 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb9E9Q5G2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb9E9Q5G2 Gm38308-201ENSMUST00000194934 1809 ntBASIC21.6■■□□□ 1.05
Pcdhb9E9Q5G2 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb9E9Q5G2 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb9E9Q5G2 Zfp783-201ENSMUST00000095946 670 ntBASIC21.6■■□□□ 1.05
Pcdhb9E9Q5G2 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Pcdhb9E9Q5G2 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdhb9E9Q5G2 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC21.59■■□□□ 1.05
Pcdhb9E9Q5G2 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb9E9Q5G2 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.59■■□□□ 1.05
Pcdhb9E9Q5G2 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb9E9Q5G2 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb9E9Q5G2 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.59■■□□□ 1.05
Pcdhb9E9Q5G2 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.59■■□□□ 1.05
Pcdhb9E9Q5G2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb9E9Q5G2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb9E9Q5G2 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdhb9E9Q5G2 Gm21596-201ENSMUST00000178049 1316 ntBASIC21.58■■□□□ 1.05
Pcdhb9E9Q5G2 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb9E9Q5G2 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb9E9Q5G2 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb9E9Q5G2 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb9E9Q5G2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC21.58■■□□□ 1.05
Pcdhb9E9Q5G2 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdhb9E9Q5G2 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb9E9Q5G2 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb9E9Q5G2 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb9E9Q5G2 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdhb9E9Q5G2 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
Pcdhb9E9Q5G2 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC21.57■■□□□ 1.04
Pcdhb9E9Q5G2 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb9E9Q5G2 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Pcdhb9E9Q5G2 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb9E9Q5G2 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC21.57■■□□□ 1.04
Pcdhb9E9Q5G2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb9E9Q5G2 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb9E9Q5G2 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Pcdhb9E9Q5G2 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb9E9Q5G2 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC21.56■■□□□ 1.04
Pcdhb9E9Q5G2 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC21.56■■□□□ 1.04
Pcdhb9E9Q5G2 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb9E9Q5G2 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC21.56■■□□□ 1.04
Pcdhb9E9Q5G2 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb9E9Q5G2 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb9E9Q5G2 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb9E9Q5G2 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb9E9Q5G2 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
Pcdhb9E9Q5G2 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Pcdhb9E9Q5G2 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb9E9Q5G2 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Pcdhb9E9Q5G2 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb9E9Q5G2 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb9E9Q5G2 Gm38285-201ENSMUST00000192928 922 ntBASIC21.55■■□□□ 1.04
Pcdhb9E9Q5G2 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb9E9Q5G2 Lrg1-201ENSMUST00000041357 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb9E9Q5G2 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb9E9Q5G2 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb9E9Q5G2 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Pcdhb9E9Q5G2 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms