Protein–RNA interactions for Protein: E9PUL3

Clca3b, Chloride channel accessory 3B, mousemouse

Predictions only

Length 1,044 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clca3bE9PUL3 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Clca3bE9PUL3 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clca3bE9PUL3 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
Clca3bE9PUL3 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clca3bE9PUL3 Gm15847-201ENSMUST00000121417 1065 ntBASIC19.79■□□□□ 0.76
Clca3bE9PUL3 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clca3bE9PUL3 Zfp560-202ENSMUST00000143992 608 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clca3bE9PUL3 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC19.79■□□□□ 0.76
Clca3bE9PUL3 Gm44878-201ENSMUST00000205812 1295 ntBASIC19.79■□□□□ 0.76
Clca3bE9PUL3 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clca3bE9PUL3 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clca3bE9PUL3 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clca3bE9PUL3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clca3bE9PUL3 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clca3bE9PUL3 Ppp1r3g-203ENSMUST00000225537 2389 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Clca3bE9PUL3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clca3bE9PUL3 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clca3bE9PUL3 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Clca3bE9PUL3 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Clca3bE9PUL3 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clca3bE9PUL3 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clca3bE9PUL3 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clca3bE9PUL3 Gm6627-201ENSMUST00000218299 2386 ntBASIC19.78■□□□□ 0.76
Clca3bE9PUL3 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clca3bE9PUL3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clca3bE9PUL3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clca3bE9PUL3 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Clca3bE9PUL3 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clca3bE9PUL3 Aup1-201ENSMUST00000092618 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clca3bE9PUL3 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Clca3bE9PUL3 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.75
Clca3bE9PUL3 Gm9194-201ENSMUST00000220749 1447 ntBASIC19.76■□□□□ 0.75
Clca3bE9PUL3 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Clca3bE9PUL3 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Clca3bE9PUL3 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clca3bE9PUL3 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clca3bE9PUL3 Gm11927-201ENSMUST00000118472 759 ntBASIC19.76■□□□□ 0.75
Clca3bE9PUL3 Chtop-204ENSMUST00000107342 2411 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Clca3bE9PUL3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Clca3bE9PUL3 Gm38308-201ENSMUST00000194934 1809 ntBASIC19.76■□□□□ 0.75
Clca3bE9PUL3 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.75■□□□□ 0.75
Clca3bE9PUL3 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC19.75■□□□□ 0.75
Clca3bE9PUL3 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clca3bE9PUL3 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clca3bE9PUL3 Zfp783-201ENSMUST00000095946 670 ntBASIC19.75■□□□□ 0.75
Clca3bE9PUL3 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clca3bE9PUL3 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Clca3bE9PUL3 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Clca3bE9PUL3 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clca3bE9PUL3 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Clca3bE9PUL3 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clca3bE9PUL3 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clca3bE9PUL3 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clca3bE9PUL3 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clca3bE9PUL3 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Clca3bE9PUL3 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Clca3bE9PUL3 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clca3bE9PUL3 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clca3bE9PUL3 Mrpl10-202ENSMUST00000054252 744 ntTSL 5 BASIC19.74■□□□□ 0.75
Clca3bE9PUL3 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clca3bE9PUL3 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Clca3bE9PUL3 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clca3bE9PUL3 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clca3bE9PUL3 Gm21596-201ENSMUST00000178049 1316 ntBASIC19.74■□□□□ 0.75
Clca3bE9PUL3 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clca3bE9PUL3 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Clca3bE9PUL3 Flg-201ENSMUST00000050758 1488 ntBASIC19.73■□□□□ 0.75
Clca3bE9PUL3 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC19.73■□□□□ 0.75
Clca3bE9PUL3 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clca3bE9PUL3 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC19.73■□□□□ 0.75
Clca3bE9PUL3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clca3bE9PUL3 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC19.73■□□□□ 0.75
Clca3bE9PUL3 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Clca3bE9PUL3 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Clca3bE9PUL3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clca3bE9PUL3 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clca3bE9PUL3 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clca3bE9PUL3 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC19.72■□□□□ 0.75
Clca3bE9PUL3 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clca3bE9PUL3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clca3bE9PUL3 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Clca3bE9PUL3 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clca3bE9PUL3 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC19.72■□□□□ 0.75
Clca3bE9PUL3 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Clca3bE9PUL3 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Clca3bE9PUL3 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC19.72■□□□□ 0.75
Clca3bE9PUL3 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC19.72■□□□□ 0.75
Clca3bE9PUL3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Clca3bE9PUL3 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Clca3bE9PUL3 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clca3bE9PUL3 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clca3bE9PUL3 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clca3bE9PUL3 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Clca3bE9PUL3 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.71■□□□□ 0.75
Clca3bE9PUL3 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clca3bE9PUL3 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.71■□□□□ 0.75
Clca3bE9PUL3 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clca3bE9PUL3 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clca3bE9PUL3 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Clca3bE9PUL3 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms