Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28043E0CXC2 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28043E0CXC2 Gm32699-201ENSMUST00000221728 1988 ntBASIC18.35■□□□□ 0.53
Gm28043E0CXC2 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28043E0CXC2 Nat14-204ENSMUST00000207687 1415 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28043E0CXC2 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28043E0CXC2 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.35■□□□□ 0.53
Gm28043E0CXC2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28043E0CXC2 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28043E0CXC2 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28043E0CXC2 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.35■□□□□ 0.53
Gm28043E0CXC2 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28043E0CXC2 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28043E0CXC2 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28043E0CXC2 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28043E0CXC2 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Gm28043E0CXC2 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28043E0CXC2 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28043E0CXC2 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28043E0CXC2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28043E0CXC2 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28043E0CXC2 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28043E0CXC2 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28043E0CXC2 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC18.34■□□□□ 0.53
Gm28043E0CXC2 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Gm28043E0CXC2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28043E0CXC2 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC18.34■□□□□ 0.53
Gm28043E0CXC2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28043E0CXC2 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28043E0CXC2 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Gm28043E0CXC2 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Gm28043E0CXC2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Gm28043E0CXC2 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC18.34■□□□□ 0.53
Gm28043E0CXC2 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm28043E0CXC2 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Gm28043E0CXC2 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm28043E0CXC2 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm28043E0CXC2 Dmtn-210ENSMUST00000228824 2377 ntBASIC18.33■□□□□ 0.53
Gm28043E0CXC2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Gm28043E0CXC2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm28043E0CXC2 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Gm28043E0CXC2 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.33■□□□□ 0.53
Gm28043E0CXC2 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Gm28043E0CXC2 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm28043E0CXC2 Mettl26-205ENSMUST00000169308 1026 ntTSL 2 BASIC18.33■□□□□ 0.52
Gm28043E0CXC2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm28043E0CXC2 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Gm28043E0CXC2 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm28043E0CXC2 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm28043E0CXC2 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Gm28043E0CXC2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm28043E0CXC2 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm28043E0CXC2 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm28043E0CXC2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Gm28043E0CXC2 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm28043E0CXC2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm28043E0CXC2 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Gm28043E0CXC2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm28043E0CXC2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Gm28043E0CXC2 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm28043E0CXC2 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Gm28043E0CXC2 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC18.32■□□□□ 0.52
Gm28043E0CXC2 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Gm28043E0CXC2 Gm37352-201ENSMUST00000193908 2181 ntBASIC18.32■□□□□ 0.52
Gm28043E0CXC2 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
Gm28043E0CXC2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Gm28043E0CXC2 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC18.32■□□□□ 0.52
Gm28043E0CXC2 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28043E0CXC2 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28043E0CXC2 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28043E0CXC2 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28043E0CXC2 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28043E0CXC2 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.31■□□□□ 0.52
Gm28043E0CXC2 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC18.31■□□□□ 0.52
Gm28043E0CXC2 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28043E0CXC2 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28043E0CXC2 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Gm28043E0CXC2 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28043E0CXC2 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC18.31■□□□□ 0.52
Gm28043E0CXC2 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28043E0CXC2 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Gm28043E0CXC2 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 Gm10153-201ENSMUST00000084415 522 ntTSL 5 BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC18.3■□□□□ 0.52
Gm28043E0CXC2 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms