Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Hfm1D3Z4R1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Hfm1D3Z4R1 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Hfm1D3Z4R1 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC25.96■■□□□ 1.75
Hfm1D3Z4R1 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Hfm1D3Z4R1 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Hfm1D3Z4R1 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Hfm1D3Z4R1 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Hfm1D3Z4R1 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Hfm1D3Z4R1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
Hfm1D3Z4R1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC25.95■■□□□ 1.75
Hfm1D3Z4R1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Hfm1D3Z4R1 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Hfm1D3Z4R1 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Hfm1D3Z4R1 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Hfm1D3Z4R1 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
Hfm1D3Z4R1 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
Hfm1D3Z4R1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC25.95■■□□□ 1.74
Hfm1D3Z4R1 Gm43353-201ENSMUST00000199224 1295 ntBASIC25.95■■□□□ 1.74
Hfm1D3Z4R1 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC25.95■■□□□ 1.74
Hfm1D3Z4R1 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.74
Hfm1D3Z4R1 Klhdc4-205ENSMUST00000174192 1584 ntTSL 5 BASIC25.94■■□□□ 1.74
Hfm1D3Z4R1 Noc2l-201ENSMUST00000179543 2785 ntAPPRIS P2 TSL 1 (best) BASIC25.94■■□□□ 1.74
Hfm1D3Z4R1 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Hfm1D3Z4R1 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC25.94■■□□□ 1.74
Hfm1D3Z4R1 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC25.94■■□□□ 1.74
Hfm1D3Z4R1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC25.94■■□□□ 1.74
Hfm1D3Z4R1 AC154471.1-201ENSMUST00000224418 436 ntBASIC25.94■■□□□ 1.74
Hfm1D3Z4R1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Hfm1D3Z4R1 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC25.93■■□□□ 1.74
Hfm1D3Z4R1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Hfm1D3Z4R1 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC25.93■■□□□ 1.74
Hfm1D3Z4R1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Hfm1D3Z4R1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
Hfm1D3Z4R1 Mir5130-201ENSMUST00000175160 84 ntBASIC25.93■■□□□ 1.74
Hfm1D3Z4R1 Gm38027-201ENSMUST00000192315 235 ntBASIC25.93■■□□□ 1.74
Hfm1D3Z4R1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Hfm1D3Z4R1 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Hfm1D3Z4R1 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC25.93■■□□□ 1.74
Hfm1D3Z4R1 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Hfm1D3Z4R1 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Hfm1D3Z4R1 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Hfm1D3Z4R1 Gm3020-202ENSMUST00000167430 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Hfm1D3Z4R1 Gm10409-201ENSMUST00000170123 1933 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Hfm1D3Z4R1 Gm12085-201ENSMUST00000119263 940 ntBASIC25.92■■□□□ 1.74
Hfm1D3Z4R1 Gm14464-201ENSMUST00000119658 1254 ntBASIC25.92■■□□□ 1.74
Hfm1D3Z4R1 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC25.92■■□□□ 1.74
Hfm1D3Z4R1 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Hfm1D3Z4R1 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Hfm1D3Z4R1 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Hfm1D3Z4R1 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC25.92■■□□□ 1.74
Hfm1D3Z4R1 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Hfm1D3Z4R1 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Hfm1D3Z4R1 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC25.92■■□□□ 1.74
Hfm1D3Z4R1 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Hfm1D3Z4R1 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Hfm1D3Z4R1 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Hfm1D3Z4R1 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Hfm1D3Z4R1 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC25.91■■□□□ 1.74
Hfm1D3Z4R1 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Hfm1D3Z4R1 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Hfm1D3Z4R1 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Hfm1D3Z4R1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Hfm1D3Z4R1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Hfm1D3Z4R1 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Hfm1D3Z4R1 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Hfm1D3Z4R1 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
Hfm1D3Z4R1 Gm18101-201ENSMUST00000215769 548 ntBASIC25.9■■□□□ 1.74
Hfm1D3Z4R1 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Hfm1D3Z4R1 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Hfm1D3Z4R1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Hfm1D3Z4R1 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC25.9■■□□□ 1.74
Hfm1D3Z4R1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC25.9■■□□□ 1.74
Hfm1D3Z4R1 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Hfm1D3Z4R1 Ppp1r1b-204ENSMUST00000137634 1343 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Hfm1D3Z4R1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Hfm1D3Z4R1 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC25.89■■□□□ 1.74
Hfm1D3Z4R1 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC25.89■■□□□ 1.74
Hfm1D3Z4R1 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC25.89■■□□□ 1.73
Hfm1D3Z4R1 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
Hfm1D3Z4R1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC25.89■■□□□ 1.73
Hfm1D3Z4R1 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC25.89■■□□□ 1.73
Hfm1D3Z4R1 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC25.89■■□□□ 1.73
Hfm1D3Z4R1 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.73
Hfm1D3Z4R1 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
Hfm1D3Z4R1 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC25.88■■□□□ 1.73
Hfm1D3Z4R1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Hfm1D3Z4R1 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC25.88■■□□□ 1.73
Hfm1D3Z4R1 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Hfm1D3Z4R1 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Hfm1D3Z4R1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC25.88■■□□□ 1.73
Hfm1D3Z4R1 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC25.88■■□□□ 1.73
Hfm1D3Z4R1 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Hfm1D3Z4R1 Crtc2-201ENSMUST00000029545 2747 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Hfm1D3Z4R1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Hfm1D3Z4R1 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Hfm1D3Z4R1 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC25.87■■□□□ 1.73
Hfm1D3Z4R1 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Hfm1D3Z4R1 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Hfm1D3Z4R1 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms