Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx8D3YU81 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx8D3YU81 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx8D3YU81 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx8D3YU81 Mid1-203ENSMUST00000079443 2815 ntTSL 5 BASIC19.41■□□□□ 0.7
Rfx8D3YU81 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.41■□□□□ 0.7
Rfx8D3YU81 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx8D3YU81 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.41■□□□□ 0.7
Rfx8D3YU81 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx8D3YU81 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Rfx8D3YU81 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx8D3YU81 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Rfx8D3YU81 Gm43182-201ENSMUST00000199476 2528 ntBASIC19.4■□□□□ 0.7
Rfx8D3YU81 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rfx8D3YU81 Arx-201ENSMUST00000046565 2881 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Rfx8D3YU81 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx8D3YU81 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx8D3YU81 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx8D3YU81 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.39■□□□□ 0.69
Rfx8D3YU81 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx8D3YU81 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx8D3YU81 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx8D3YU81 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx8D3YU81 Gm7856-201ENSMUST00000117514 1493 ntBASIC19.39■□□□□ 0.69
Rfx8D3YU81 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.39■□□□□ 0.69
Rfx8D3YU81 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx8D3YU81 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx8D3YU81 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Rfx8D3YU81 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx8D3YU81 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.38■□□□□ 0.69
Rfx8D3YU81 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Rfx8D3YU81 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx8D3YU81 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx8D3YU81 Gm6211-202ENSMUST00000167849 925 ntBASIC19.38■□□□□ 0.69
Rfx8D3YU81 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx8D3YU81 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC19.38■□□□□ 0.69
Rfx8D3YU81 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Rfx8D3YU81 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC19.38■□□□□ 0.69
Rfx8D3YU81 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx8D3YU81 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Rfx8D3YU81 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx8D3YU81 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Rfx8D3YU81 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx8D3YU81 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx8D3YU81 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Rfx8D3YU81 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx8D3YU81 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Rfx8D3YU81 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Rfx8D3YU81 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx8D3YU81 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Rfx8D3YU81 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx8D3YU81 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx8D3YU81 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx8D3YU81 Wtap-205ENSMUST00000160781 2442 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx8D3YU81 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC19.36■□□□□ 0.69
Rfx8D3YU81 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx8D3YU81 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx8D3YU81 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rfx8D3YU81 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx8D3YU81 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
Rfx8D3YU81 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx8D3YU81 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC19.36■□□□□ 0.69
Rfx8D3YU81 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC19.36■□□□□ 0.69
Rfx8D3YU81 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx8D3YU81 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Rfx8D3YU81 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Rfx8D3YU81 Gm15853-202ENSMUST00000195518 2041 ntBASIC19.35■□□□□ 0.69
Rfx8D3YU81 Gm8309-201ENSMUST00000206627 1448 ntBASIC19.35■□□□□ 0.69
Rfx8D3YU81 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rfx8D3YU81 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC19.35■□□□□ 0.69
Rfx8D3YU81 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Rfx8D3YU81 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx8D3YU81 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx8D3YU81 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
Rfx8D3YU81 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx8D3YU81 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx8D3YU81 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Rfx8D3YU81 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms