Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd6A3KFM7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Chd6A3KFM7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chd6A3KFM7 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd6A3KFM7 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd6A3KFM7 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chd6A3KFM7 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd6A3KFM7 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chd6A3KFM7 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC14.98□□□□□ -0.01
Chd6A3KFM7 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Chd6A3KFM7 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.98□□□□□ -0.01
Chd6A3KFM7 Gm10576-201ENSMUST00000191927 825 ntBASIC14.98□□□□□ -0.01
Chd6A3KFM7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC14.98□□□□□ -0.01
Chd6A3KFM7 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.98□□□□□ -0.01
Chd6A3KFM7 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.98□□□□□ -0.01
Chd6A3KFM7 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd6A3KFM7 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd6A3KFM7 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd6A3KFM7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC14.98□□□□□ -0.01
Chd6A3KFM7 Gm6736-201ENSMUST00000166583 948 ntBASIC14.98□□□□□ -0.01
Chd6A3KFM7 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.98□□□□□ -0.01
Chd6A3KFM7 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Chd6A3KFM7 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chd6A3KFM7 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd6A3KFM7 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chd6A3KFM7 Gm43575-201ENSMUST00000196420 516 ntBASIC14.97□□□□□ -0.01
Chd6A3KFM7 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chd6A3KFM7 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Chd6A3KFM7 Ube2d1-201ENSMUST00000020085 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd6A3KFM7 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd6A3KFM7 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd6A3KFM7 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd6A3KFM7 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd6A3KFM7 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC14.97□□□□□ -0.01
Chd6A3KFM7 Gm13884-201ENSMUST00000118103 829 ntBASIC14.97□□□□□ -0.01
Chd6A3KFM7 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Chd6A3KFM7 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
Chd6A3KFM7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd6A3KFM7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd6A3KFM7 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Chd6A3KFM7 Gm10175-201ENSMUST00000086013 645 ntBASIC14.97□□□□□ -0.01
Chd6A3KFM7 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
Chd6A3KFM7 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chd6A3KFM7 CT943659.1-201ENSMUST00000215459 326 ntBASIC14.96□□□□□ -0.01
Chd6A3KFM7 Gm21559-201ENSMUST00000220638 855 ntBASIC14.96□□□□□ -0.01
Chd6A3KFM7 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Chd6A3KFM7 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chd6A3KFM7 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chd6A3KFM7 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chd6A3KFM7 Tmsb4x-202ENSMUST00000112175 864 ntTSL 2 BASIC14.96□□□□□ -0.01
Chd6A3KFM7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chd6A3KFM7 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Chd6A3KFM7 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC14.96□□□□□ -0.01
Chd6A3KFM7 Otx2os1-206ENSMUST00000228153 787 ntBASIC14.96□□□□□ -0.01
Chd6A3KFM7 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.96□□□□□ -0.01
Chd6A3KFM7 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Chd6A3KFM7 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chd6A3KFM7 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC14.96□□□□□ -0.02
Chd6A3KFM7 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Chd6A3KFM7 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC14.95□□□□□ -0.02
Chd6A3KFM7 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd6A3KFM7 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd6A3KFM7 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Chd6A3KFM7 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chd6A3KFM7 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd6A3KFM7 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chd6A3KFM7 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chd6A3KFM7 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chd6A3KFM7 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chd6A3KFM7 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd6A3KFM7 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Chd6A3KFM7 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chd6A3KFM7 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chd6A3KFM7 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Chd6A3KFM7 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd6A3KFM7 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Chd6A3KFM7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd6A3KFM7 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chd6A3KFM7 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chd6A3KFM7 AA386476-201ENSMUST00000098781 1665 ntBASIC14.94□□□□□ -0.02
Chd6A3KFM7 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Chd6A3KFM7 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd6A3KFM7 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chd6A3KFM7 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd6A3KFM7 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Chd6A3KFM7 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chd6A3KFM7 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd6A3KFM7 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chd6A3KFM7 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd6A3KFM7 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chd6A3KFM7 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Chd6A3KFM7 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Chd6A3KFM7 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Chd6A3KFM7 Gm5264-201ENSMUST00000190584 848 ntBASIC14.94□□□□□ -0.02
Chd6A3KFM7 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Chd6A3KFM7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC14.93□□□□□ -0.02
Chd6A3KFM7 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC14.93□□□□□ -0.02
Chd6A3KFM7 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Chd6A3KFM7 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
Chd6A3KFM7 Gm17808-201ENSMUST00000200859 894 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms