Protein–RNA interactions for Protein: A2ASI5

Scn3a, Sodium channel protein, mousemouse

Predictions only

Length 1,947 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn3aA2ASI5 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC20.58■□□□□ 0.88
Scn3aA2ASI5 Gm43183-201ENSMUST00000200632 547 ntBASIC20.58■□□□□ 0.88
Scn3aA2ASI5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scn3aA2ASI5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC20.58■□□□□ 0.88
Scn3aA2ASI5 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scn3aA2ASI5 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Scn3aA2ASI5 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Scn3aA2ASI5 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
Scn3aA2ASI5 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC20.57■□□□□ 0.88
Scn3aA2ASI5 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.57■□□□□ 0.88
Scn3aA2ASI5 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Scn3aA2ASI5 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.57■□□□□ 0.88
Scn3aA2ASI5 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC20.57■□□□□ 0.88
Scn3aA2ASI5 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scn3aA2ASI5 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn3aA2ASI5 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scn3aA2ASI5 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scn3aA2ASI5 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.57■□□□□ 0.88
Scn3aA2ASI5 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Scn3aA2ASI5 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.57■□□□□ 0.88
Scn3aA2ASI5 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC20.57■□□□□ 0.88
Scn3aA2ASI5 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Scn3aA2ASI5 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.56■□□□□ 0.88
Scn3aA2ASI5 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scn3aA2ASI5 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn3aA2ASI5 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC20.56■□□□□ 0.88
Scn3aA2ASI5 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Scn3aA2ASI5 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn3aA2ASI5 Gm38345-201ENSMUST00000192635 1748 ntBASIC20.56■□□□□ 0.88
Scn3aA2ASI5 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Scn3aA2ASI5 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Scn3aA2ASI5 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn3aA2ASI5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn3aA2ASI5 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn3aA2ASI5 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scn3aA2ASI5 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn3aA2ASI5 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn3aA2ASI5 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.55■□□□□ 0.88
Scn3aA2ASI5 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn3aA2ASI5 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
Scn3aA2ASI5 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Scn3aA2ASI5 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.55■□□□□ 0.88
Scn3aA2ASI5 Gm29994-201ENSMUST00000195495 1193 ntBASIC20.55■□□□□ 0.88
Scn3aA2ASI5 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn3aA2ASI5 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Scn3aA2ASI5 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Scn3aA2ASI5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn3aA2ASI5 Notumos-201ENSMUST00000151998 2659 ntBASIC20.54■□□□□ 0.88
Scn3aA2ASI5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn3aA2ASI5 Krtap5-1-202ENSMUST00000188274 742 ntBASIC20.54■□□□□ 0.88
Scn3aA2ASI5 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn3aA2ASI5 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn3aA2ASI5 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn3aA2ASI5 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC20.54■□□□□ 0.88
Scn3aA2ASI5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Scn3aA2ASI5 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.53■□□□□ 0.88
Scn3aA2ASI5 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Scn3aA2ASI5 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC20.53■□□□□ 0.88
Scn3aA2ASI5 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.53■□□□□ 0.88
Scn3aA2ASI5 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn3aA2ASI5 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn3aA2ASI5 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn3aA2ASI5 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn3aA2ASI5 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Scn3aA2ASI5 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn3aA2ASI5 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn3aA2ASI5 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn3aA2ASI5 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Scn3aA2ASI5 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Scn3aA2ASI5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn3aA2ASI5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scn3aA2ASI5 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn3aA2ASI5 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.52■□□□□ 0.88
Scn3aA2ASI5 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scn3aA2ASI5 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn3aA2ASI5 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scn3aA2ASI5 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Scn3aA2ASI5 Gm43799-201ENSMUST00000201845 579 ntBASIC20.52■□□□□ 0.88
Scn3aA2ASI5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC20.52■□□□□ 0.88
Scn3aA2ASI5 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Scn3aA2ASI5 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn3aA2ASI5 Gm7856-201ENSMUST00000117514 1493 ntBASIC20.51■□□□□ 0.87
Scn3aA2ASI5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC20.51■□□□□ 0.87
Scn3aA2ASI5 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn3aA2ASI5 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC20.51■□□□□ 0.87
Scn3aA2ASI5 Gm38308-201ENSMUST00000194934 1809 ntBASIC20.51■□□□□ 0.87
Scn3aA2ASI5 Gm42922-201ENSMUST00000195887 2078 ntBASIC20.51■□□□□ 0.87
Scn3aA2ASI5 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scn3aA2ASI5 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Scn3aA2ASI5 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC20.51■□□□□ 0.87
Scn3aA2ASI5 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
Scn3aA2ASI5 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.51■□□□□ 0.87
Scn3aA2ASI5 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn3aA2ASI5 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn3aA2ASI5 Gm5417-201ENSMUST00000079706 384 ntBASIC20.51■□□□□ 0.87
Scn3aA2ASI5 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Scn3aA2ASI5 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC20.5■□□□□ 0.87
Scn3aA2ASI5 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Scn3aA2ASI5 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Scn3aA2ASI5 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms