Protein–RNA interactions for Protein: A1A546

Isx, Intestine-specific homeobox, mousemouse

Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IsxA1A546 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.31
IsxA1A546 Gm37194-201ENSMUST00000193092 3031 ntBASIC17.02■□□□□ 0.31
IsxA1A546 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IsxA1A546 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
IsxA1A546 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IsxA1A546 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC17.01■□□□□ 0.31
IsxA1A546 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IsxA1A546 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IsxA1A546 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
IsxA1A546 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IsxA1A546 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IsxA1A546 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IsxA1A546 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
IsxA1A546 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IsxA1A546 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
IsxA1A546 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
IsxA1A546 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.01■□□□□ 0.31
IsxA1A546 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17■□□□□ 0.31
IsxA1A546 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17■□□□□ 0.31
IsxA1A546 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17■□□□□ 0.31
IsxA1A546 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IsxA1A546 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
IsxA1A546 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
IsxA1A546 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
IsxA1A546 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
IsxA1A546 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IsxA1A546 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC17■□□□□ 0.31
IsxA1A546 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IsxA1A546 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
IsxA1A546 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC17■□□□□ 0.31
IsxA1A546 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC17■□□□□ 0.31
IsxA1A546 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17■□□□□ 0.31
IsxA1A546 Gm43034-201ENSMUST00000198678 1364 ntBASIC17■□□□□ 0.31
IsxA1A546 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
IsxA1A546 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IsxA1A546 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IsxA1A546 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IsxA1A546 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
IsxA1A546 Dynll2-202ENSMUST00000107923 2443 ntAPPRIS P1 TSL 3 BASIC16.99■□□□□ 0.31
IsxA1A546 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IsxA1A546 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IsxA1A546 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC16.99■□□□□ 0.31
IsxA1A546 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IsxA1A546 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IsxA1A546 Gm9870-201ENSMUST00000063874 645 ntBASIC16.99■□□□□ 0.31
IsxA1A546 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
IsxA1A546 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IsxA1A546 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
IsxA1A546 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
IsxA1A546 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IsxA1A546 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
IsxA1A546 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
IsxA1A546 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
IsxA1A546 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
IsxA1A546 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IsxA1A546 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IsxA1A546 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IsxA1A546 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
IsxA1A546 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IsxA1A546 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
IsxA1A546 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IsxA1A546 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IsxA1A546 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IsxA1A546 Gm12922-201ENSMUST00000120626 809 ntBASIC16.98■□□□□ 0.31
IsxA1A546 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IsxA1A546 Serp2-204ENSMUST00000228055 705 ntBASIC16.98■□□□□ 0.31
IsxA1A546 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
IsxA1A546 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
IsxA1A546 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IsxA1A546 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IsxA1A546 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IsxA1A546 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
IsxA1A546 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IsxA1A546 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IsxA1A546 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IsxA1A546 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IsxA1A546 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
IsxA1A546 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IsxA1A546 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
IsxA1A546 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IsxA1A546 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IsxA1A546 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IsxA1A546 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
IsxA1A546 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
IsxA1A546 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC16.97■□□□□ 0.31
IsxA1A546 Gm8969-201ENSMUST00000199694 526 ntBASIC16.97■□□□□ 0.31
IsxA1A546 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
IsxA1A546 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
IsxA1A546 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IsxA1A546 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
IsxA1A546 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
IsxA1A546 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IsxA1A546 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IsxA1A546 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
IsxA1A546 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IsxA1A546 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IsxA1A546 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
IsxA1A546 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
IsxA1A546 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
IsxA1A546 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms