Protein–RNA interactions for Protein: A0A1B0GSK3

Lnp1, Leukemia NUP98 fusion partner 1, mousemouse

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lnp1A0A1B0GSK3 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lnp1A0A1B0GSK3 Gm10849-201ENSMUST00000100397 618 ntBASIC15.27■□□□□ 0.04
Lnp1A0A1B0GSK3 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lnp1A0A1B0GSK3 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lnp1A0A1B0GSK3 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lnp1A0A1B0GSK3 Gm8495-201ENSMUST00000188740 694 ntBASIC15.27■□□□□ 0.04
Lnp1A0A1B0GSK3 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lnp1A0A1B0GSK3 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lnp1A0A1B0GSK3 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lnp1A0A1B0GSK3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lnp1A0A1B0GSK3 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Lnp1A0A1B0GSK3 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lnp1A0A1B0GSK3 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Lnp1A0A1B0GSK3 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Lnp1A0A1B0GSK3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lnp1A0A1B0GSK3 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lnp1A0A1B0GSK3 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lnp1A0A1B0GSK3 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lnp1A0A1B0GSK3 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lnp1A0A1B0GSK3 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lnp1A0A1B0GSK3 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Lnp1A0A1B0GSK3 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lnp1A0A1B0GSK3 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
Lnp1A0A1B0GSK3 Gm42569-201ENSMUST00000200539 472 ntBASIC15.26■□□□□ 0.03
Lnp1A0A1B0GSK3 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
Lnp1A0A1B0GSK3 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Lnp1A0A1B0GSK3 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lnp1A0A1B0GSK3 Gls2-201ENSMUST00000044776 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Lnp1A0A1B0GSK3 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lnp1A0A1B0GSK3 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lnp1A0A1B0GSK3 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lnp1A0A1B0GSK3 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lnp1A0A1B0GSK3 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lnp1A0A1B0GSK3 Gm5953-201ENSMUST00000220644 2616 ntBASIC15.25■□□□□ 0.03
Lnp1A0A1B0GSK3 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lnp1A0A1B0GSK3 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC15.25■□□□□ 0.03
Lnp1A0A1B0GSK3 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lnp1A0A1B0GSK3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lnp1A0A1B0GSK3 Gm7856-201ENSMUST00000117514 1493 ntBASIC15.25■□□□□ 0.03
Lnp1A0A1B0GSK3 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Lnp1A0A1B0GSK3 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Lnp1A0A1B0GSK3 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lnp1A0A1B0GSK3 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC15.24■□□□□ 0.03
Lnp1A0A1B0GSK3 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lnp1A0A1B0GSK3 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lnp1A0A1B0GSK3 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.24■□□□□ 0.03
Lnp1A0A1B0GSK3 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lnp1A0A1B0GSK3 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC15.24■□□□□ 0.03
Lnp1A0A1B0GSK3 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lnp1A0A1B0GSK3 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Lnp1A0A1B0GSK3 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lnp1A0A1B0GSK3 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lnp1A0A1B0GSK3 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lnp1A0A1B0GSK3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lnp1A0A1B0GSK3 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.24■□□□□ 0.03
Lnp1A0A1B0GSK3 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lnp1A0A1B0GSK3 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lnp1A0A1B0GSK3 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Lnp1A0A1B0GSK3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Lnp1A0A1B0GSK3 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lnp1A0A1B0GSK3 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Lnp1A0A1B0GSK3 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Lnp1A0A1B0GSK3 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Lnp1A0A1B0GSK3 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Lnp1A0A1B0GSK3 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC15.23■□□□□ 0.03
Lnp1A0A1B0GSK3 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Lnp1A0A1B0GSK3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Lnp1A0A1B0GSK3 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Lnp1A0A1B0GSK3 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lnp1A0A1B0GSK3 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lnp1A0A1B0GSK3 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lnp1A0A1B0GSK3 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC15.22■□□□□ 0.03
Lnp1A0A1B0GSK3 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lnp1A0A1B0GSK3 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lnp1A0A1B0GSK3 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Lnp1A0A1B0GSK3 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lnp1A0A1B0GSK3 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lnp1A0A1B0GSK3 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lnp1A0A1B0GSK3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Lnp1A0A1B0GSK3 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lnp1A0A1B0GSK3 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lnp1A0A1B0GSK3 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lnp1A0A1B0GSK3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lnp1A0A1B0GSK3 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lnp1A0A1B0GSK3 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lnp1A0A1B0GSK3 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.21■□□□□ 0.03
Lnp1A0A1B0GSK3 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lnp1A0A1B0GSK3 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lnp1A0A1B0GSK3 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC15.21■□□□□ 0.03
Lnp1A0A1B0GSK3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lnp1A0A1B0GSK3 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lnp1A0A1B0GSK3 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lnp1A0A1B0GSK3 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lnp1A0A1B0GSK3 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lnp1A0A1B0GSK3 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lnp1A0A1B0GSK3 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lnp1A0A1B0GSK3 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.02
Lnp1A0A1B0GSK3 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lnp1A0A1B0GSK3 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lnp1A0A1B0GSK3 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 28.9 ms