Protein–RNA interactions for Protein: A0A140T8P8

Trbv17, T cell receptor beta, variable 17 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv17A0A140T8P8 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Chd3os-201ENSMUST00000129321 2081 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Gm42569-201ENSMUST00000200539 472 ntBASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Rncr4-201ENSMUST00000194541 2234 ntBASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Trbv17A0A140T8P8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Gm43182-201ENSMUST00000199476 2528 ntBASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 AV356131-201ENSMUST00000206201 750 ntBASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Gm7514-201ENSMUST00000209475 934 ntBASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Mdfi-201ENSMUST00000035375 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Sae1-204ENSMUST00000211741 1663 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Trbv17A0A140T8P8 Bmp6-201ENSMUST00000171970 3593 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv17A0A140T8P8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv17A0A140T8P8 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
Trbv17A0A140T8P8 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Trbv17A0A140T8P8 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv17A0A140T8P8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv17A0A140T8P8 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv17A0A140T8P8 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv17A0A140T8P8 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv17A0A140T8P8 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Trbv17A0A140T8P8 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.02□□□□□ -0.16
Trbv17A0A140T8P8 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Trbv17A0A140T8P8 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.02□□□□□ -0.17
Trbv17A0A140T8P8 Gm10033-202ENSMUST00000211874 928 ntBASIC14.02□□□□□ -0.17
Trbv17A0A140T8P8 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv17A0A140T8P8 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
Trbv17A0A140T8P8 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv17A0A140T8P8 Gm5784-201ENSMUST00000179344 2478 ntBASIC14.02□□□□□ -0.17
Trbv17A0A140T8P8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv17A0A140T8P8 Relb-202ENSMUST00000094762 2209 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv17A0A140T8P8 Relb-203ENSMUST00000098754 2203 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Trbv17A0A140T8P8 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv17A0A140T8P8 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Trbv17A0A140T8P8 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Gm13146-201ENSMUST00000118508 780 ntBASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Trbv17A0A140T8P8 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC14□□□□□ -0.17
Trbv17A0A140T8P8 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms