Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc194A0A140LIT1 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
Ccdc194A0A140LIT1 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
Ccdc194A0A140LIT1 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc194A0A140LIT1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc194A0A140LIT1 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC18.26■□□□□ 0.51
Ccdc194A0A140LIT1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Ccdc194A0A140LIT1 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc194A0A140LIT1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC18.26■□□□□ 0.51
Ccdc194A0A140LIT1 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc194A0A140LIT1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc194A0A140LIT1 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc194A0A140LIT1 Gm43213-201ENSMUST00000151866 1790 ntBASIC18.26■□□□□ 0.51
Ccdc194A0A140LIT1 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc194A0A140LIT1 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc194A0A140LIT1 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Ccdc194A0A140LIT1 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ccdc194A0A140LIT1 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Lhfp-201ENSMUST00000059562 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ccdc194A0A140LIT1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc194A0A140LIT1 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc194A0A140LIT1 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc194A0A140LIT1 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc194A0A140LIT1 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc194A0A140LIT1 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc194A0A140LIT1 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC18.24■□□□□ 0.51
Ccdc194A0A140LIT1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc194A0A140LIT1 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.24■□□□□ 0.51
Ccdc194A0A140LIT1 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc194A0A140LIT1 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc194A0A140LIT1 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ccdc194A0A140LIT1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc194A0A140LIT1 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc194A0A140LIT1 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc194A0A140LIT1 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc194A0A140LIT1 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc194A0A140LIT1 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc194A0A140LIT1 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc194A0A140LIT1 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc194A0A140LIT1 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc194A0A140LIT1 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Ccdc194A0A140LIT1 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.23■□□□□ 0.51
Ccdc194A0A140LIT1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC18.23■□□□□ 0.51
Ccdc194A0A140LIT1 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc194A0A140LIT1 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC18.23■□□□□ 0.51
Ccdc194A0A140LIT1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc194A0A140LIT1 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
Ccdc194A0A140LIT1 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.23■□□□□ 0.51
Ccdc194A0A140LIT1 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Ccdc194A0A140LIT1 Gm42922-201ENSMUST00000195887 2078 ntBASIC18.22■□□□□ 0.51
Ccdc194A0A140LIT1 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
Ccdc194A0A140LIT1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc194A0A140LIT1 Gm35558-201ENSMUST00000222675 2219 ntBASIC18.22■□□□□ 0.51
Ccdc194A0A140LIT1 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc194A0A140LIT1 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc194A0A140LIT1 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc194A0A140LIT1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.22■□□□□ 0.51
Ccdc194A0A140LIT1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC18.22■□□□□ 0.51
Ccdc194A0A140LIT1 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc194A0A140LIT1 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc194A0A140LIT1 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc194A0A140LIT1 AC123834.2-201ENSMUST00000224038 2340 ntBASIC18.22■□□□□ 0.51
Ccdc194A0A140LIT1 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc194A0A140LIT1 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc194A0A140LIT1 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
Ccdc194A0A140LIT1 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc194A0A140LIT1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc194A0A140LIT1 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc194A0A140LIT1 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
Ccdc194A0A140LIT1 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc194A0A140LIT1 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.21■□□□□ 0.51
Ccdc194A0A140LIT1 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.21■□□□□ 0.51
Ccdc194A0A140LIT1 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc194A0A140LIT1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC18.21■□□□□ 0.51
Ccdc194A0A140LIT1 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Ccdc194A0A140LIT1 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc194A0A140LIT1 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc194A0A140LIT1 Tyw5-209ENSMUST00000162686 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc194A0A140LIT1 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc194A0A140LIT1 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.21■□□□□ 0.51
Ccdc194A0A140LIT1 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms