Protein–RNA interactions for Protein: A0A0G2JGB9

Trdv2-1, T cell receptor delta variable 2-1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv2-1A0A0G2JGB9 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Gm43566-201ENSMUST00000196851 808 ntBASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Gm10232-201ENSMUST00000089221 720 ntBASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Pick1-201ENSMUST00000018295 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC13.46□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trdv2-1A0A0G2JGB9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trdv2-1A0A0G2JGB9 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Trdv2-1A0A0G2JGB9 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms