Protein–RNA interactions for Protein: A0A0G2JG37

Trav9d-4, T cell receptor alpha variable 9D-4 (Fragment), mousemouse

Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-4A0A0G2JG37 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9d-4A0A0G2JG37 Gm42922-201ENSMUST00000195887 2078 ntBASIC12.59□□□□□ -0.39
Trav9d-4A0A0G2JG37 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9d-4A0A0G2JG37 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9d-4A0A0G2JG37 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC12.59□□□□□ -0.39
Trav9d-4A0A0G2JG37 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9d-4A0A0G2JG37 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav9d-4A0A0G2JG37 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav9d-4A0A0G2JG37 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9d-4A0A0G2JG37 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9d-4A0A0G2JG37 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9d-4A0A0G2JG37 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9d-4A0A0G2JG37 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9d-4A0A0G2JG37 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav9d-4A0A0G2JG37 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Trav9d-4A0A0G2JG37 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.39
Trav9d-4A0A0G2JG37 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Trav9d-4A0A0G2JG37 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav9d-4A0A0G2JG37 Fam53a-202ENSMUST00000065119 2009 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9d-4A0A0G2JG37 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9d-4A0A0G2JG37 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9d-4A0A0G2JG37 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC12.57□□□□□ -0.4
Trav9d-4A0A0G2JG37 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9d-4A0A0G2JG37 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9d-4A0A0G2JG37 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav9d-4A0A0G2JG37 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9d-4A0A0G2JG37 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9d-4A0A0G2JG37 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Trav9d-4A0A0G2JG37 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Trav9d-4A0A0G2JG37 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC12.57□□□□□ -0.4
Trav9d-4A0A0G2JG37 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Trav9d-4A0A0G2JG37 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9d-4A0A0G2JG37 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9d-4A0A0G2JG37 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9d-4A0A0G2JG37 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.56□□□□□ -0.4
Trav9d-4A0A0G2JG37 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9d-4A0A0G2JG37 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9d-4A0A0G2JG37 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9d-4A0A0G2JG37 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9d-4A0A0G2JG37 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC12.56□□□□□ -0.4
Trav9d-4A0A0G2JG37 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9d-4A0A0G2JG37 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9d-4A0A0G2JG37 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9d-4A0A0G2JG37 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9d-4A0A0G2JG37 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9d-4A0A0G2JG37 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9d-4A0A0G2JG37 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav9d-4A0A0G2JG37 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav9d-4A0A0G2JG37 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9d-4A0A0G2JG37 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9d-4A0A0G2JG37 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav9d-4A0A0G2JG37 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9d-4A0A0G2JG37 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9d-4A0A0G2JG37 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC12.55□□□□□ -0.4
Trav9d-4A0A0G2JG37 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9d-4A0A0G2JG37 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9d-4A0A0G2JG37 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9d-4A0A0G2JG37 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9d-4A0A0G2JG37 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav9d-4A0A0G2JG37 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav9d-4A0A0G2JG37 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav9d-4A0A0G2JG37 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 Gm43759-201ENSMUST00000196925 1261 ntBASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav9d-4A0A0G2JG37 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms