Protein–RNA interactions for Protein: A0A0G2JF28

Igkv8-27, Immunoglobulin kappa chain variable 8-27 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-27A0A0G2JF28 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC11.53□□□□□ -0.56
Igkv8-27A0A0G2JF28 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Igkv8-27A0A0G2JF28 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv8-27A0A0G2JF28 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv8-27A0A0G2JF28 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv8-27A0A0G2JF28 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv8-27A0A0G2JF28 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv8-27A0A0G2JF28 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.56
Igkv8-27A0A0G2JF28 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.56
Igkv8-27A0A0G2JF28 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.56
Igkv8-27A0A0G2JF28 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC11.52□□□□□ -0.56
Igkv8-27A0A0G2JF28 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Igkv8-27A0A0G2JF28 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Igkv8-27A0A0G2JF28 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC11.52□□□□□ -0.56
Igkv8-27A0A0G2JF28 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC11.52□□□□□ -0.56
Igkv8-27A0A0G2JF28 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Igkv8-27A0A0G2JF28 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Igkv8-27A0A0G2JF28 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Igkv8-27A0A0G2JF28 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-27A0A0G2JF28 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-27A0A0G2JF28 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-27A0A0G2JF28 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-27A0A0G2JF28 Gm16464-201ENSMUST00000117815 1095 ntBASIC11.52□□□□□ -0.57
Igkv8-27A0A0G2JF28 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC11.52□□□□□ -0.57
Igkv8-27A0A0G2JF28 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-27A0A0G2JF28 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-27A0A0G2JF28 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-27A0A0G2JF28 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-27A0A0G2JF28 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-27A0A0G2JF28 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-27A0A0G2JF28 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC11.52□□□□□ -0.57
Igkv8-27A0A0G2JF28 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-27A0A0G2JF28 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-27A0A0G2JF28 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-27A0A0G2JF28 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-27A0A0G2JF28 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-27A0A0G2JF28 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-27A0A0G2JF28 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC11.5□□□□□ -0.57
Igkv8-27A0A0G2JF28 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-27A0A0G2JF28 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-27A0A0G2JF28 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-27A0A0G2JF28 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC11.49□□□□□ -0.57
Igkv8-27A0A0G2JF28 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-27A0A0G2JF28 Eid2b-201ENSMUST00000094651 1751 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Igkv8-27A0A0G2JF28 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-27A0A0G2JF28 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Igkv8-27A0A0G2JF28 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-27A0A0G2JF28 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Igkv8-27A0A0G2JF28 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-27A0A0G2JF28 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-27A0A0G2JF28 Gm8969-201ENSMUST00000199694 526 ntBASIC11.49□□□□□ -0.57
Igkv8-27A0A0G2JF28 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC11.49□□□□□ -0.57
Igkv8-27A0A0G2JF28 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-27A0A0G2JF28 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-27A0A0G2JF28 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-27A0A0G2JF28 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC11.49□□□□□ -0.57
Igkv8-27A0A0G2JF28 Rad1-201ENSMUST00000022856 1514 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms