Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-1A0A0G2JEU8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Gm12441-201ENSMUST00000121806 588 ntBASIC13.25□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Hs3st5-202ENSMUST00000167191 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC13.25□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC13.25□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Gm43231-201ENSMUST00000202960 2258 ntBASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Syncrip-205ENSMUST00000173801 2944 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Rnf157-202ENSMUST00000106398 4553 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Gm13148-201ENSMUST00000118892 745 ntBASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 AC131586.2-201ENSMUST00000228370 1512 ntBASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC13.22□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-1A0A0G2JEU8 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-1A0A0G2JEU8 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Map7-201ENSMUST00000020173 4252 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Trav13n-1A0A0G2JEU8 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC13.22□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC13.21□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Akt2-205ENSMUST00000108344 4544 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-1A0A0G2JEU8 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Trav13n-1A0A0G2JEU8 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms