Protein–RNA interactions for Protein: A0A0G2JE47

Igkv8-28, Immunoglobulin kappa variable 8-28 (Fragment), mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv8-28A0A0G2JE47 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Igkv8-28A0A0G2JE47 Actl6a-201ENSMUST00000029214 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.56
Igkv8-28A0A0G2JE47 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-28A0A0G2JE47 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC11.52□□□□□ -0.57
Igkv8-28A0A0G2JE47 Gm6598-201ENSMUST00000202719 2615 ntBASIC11.52□□□□□ -0.57
Igkv8-28A0A0G2JE47 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-28A0A0G2JE47 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-28A0A0G2JE47 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-28A0A0G2JE47 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-28A0A0G2JE47 Gm13238-201ENSMUST00000117655 780 ntBASIC11.52□□□□□ -0.57
Igkv8-28A0A0G2JE47 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-28A0A0G2JE47 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-28A0A0G2JE47 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-28A0A0G2JE47 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-28A0A0G2JE47 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-28A0A0G2JE47 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-28A0A0G2JE47 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-28A0A0G2JE47 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.52□□□□□ -0.57
Igkv8-28A0A0G2JE47 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC11.52□□□□□ -0.57
Igkv8-28A0A0G2JE47 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.52□□□□□ -0.57
Igkv8-28A0A0G2JE47 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Gm15635-204ENSMUST00000208024 2539 ntBASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC11.51□□□□□ -0.57
Igkv8-28A0A0G2JE47 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 AC154266.1-201ENSMUST00000223190 503 ntBASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.5□□□□□ -0.57
Igkv8-28A0A0G2JE47 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-28A0A0G2JE47 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-28A0A0G2JE47 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-28A0A0G2JE47 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-28A0A0G2JE47 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-28A0A0G2JE47 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-28A0A0G2JE47 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-28A0A0G2JE47 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC11.49□□□□□ -0.57
Igkv8-28A0A0G2JE47 Fcho2-208ENSMUST00000224992 2964 ntBASIC11.49□□□□□ -0.57
Igkv8-28A0A0G2JE47 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-28A0A0G2JE47 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
Igkv8-28A0A0G2JE47 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-28A0A0G2JE47 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-28A0A0G2JE47 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-28A0A0G2JE47 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-28A0A0G2JE47 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-28A0A0G2JE47 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
Igkv8-28A0A0G2JE47 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv8-28A0A0G2JE47 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv8-28A0A0G2JE47 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv8-28A0A0G2JE47 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv8-28A0A0G2JE47 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv8-28A0A0G2JE47 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC11.48□□□□□ -0.57
Igkv8-28A0A0G2JE47 Gm42501-201ENSMUST00000200220 1026 ntBASIC11.48□□□□□ -0.57
Igkv8-28A0A0G2JE47 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv8-28A0A0G2JE47 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Igkv8-28A0A0G2JE47 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv8-28A0A0G2JE47 Bicdl1-203ENSMUST00000118576 1874 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Igkv8-28A0A0G2JE47 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC11.48□□□□□ -0.57
Igkv8-28A0A0G2JE47 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC11.48□□□□□ -0.57
Retrieved 100 of 76,532 protein–RNA pairs in 41.3 ms