Protein–RNA interactions for Protein: A0A0B4J1H5

Trbv20, T cell receptor beta, variable 20 (Fragment), mousemouse

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv20A0A0B4J1H5 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC16.43■□□□□ 0.22
Trbv20A0A0B4J1H5 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv20A0A0B4J1H5 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trbv20A0A0B4J1H5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv20A0A0B4J1H5 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv20A0A0B4J1H5 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv20A0A0B4J1H5 Gm7860-201ENSMUST00000121190 879 ntBASIC16.43■□□□□ 0.22
Trbv20A0A0B4J1H5 Gm22238-201ENSMUST00000175222 88 ntBASIC16.43■□□□□ 0.22
Trbv20A0A0B4J1H5 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC16.43■□□□□ 0.22
Trbv20A0A0B4J1H5 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC16.43■□□□□ 0.22
Trbv20A0A0B4J1H5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv20A0A0B4J1H5 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv20A0A0B4J1H5 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv20A0A0B4J1H5 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trbv20A0A0B4J1H5 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv20A0A0B4J1H5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trbv20A0A0B4J1H5 Gm9194-201ENSMUST00000220749 1447 ntBASIC16.43■□□□□ 0.22
Trbv20A0A0B4J1H5 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trbv20A0A0B4J1H5 Cspg5-202ENSMUST00000196060 3790 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Gm45244-201ENSMUST00000211328 2200 ntBASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC16.42■□□□□ 0.22
Trbv20A0A0B4J1H5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv20A0A0B4J1H5 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv20A0A0B4J1H5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv20A0A0B4J1H5 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv20A0A0B4J1H5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv20A0A0B4J1H5 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC16.41■□□□□ 0.22
Trbv20A0A0B4J1H5 Gfra4-201ENSMUST00000028787 909 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv20A0A0B4J1H5 Rras-201ENSMUST00000044111 995 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv20A0A0B4J1H5 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv20A0A0B4J1H5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv20A0A0B4J1H5 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv20A0A0B4J1H5 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv20A0A0B4J1H5 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trbv20A0A0B4J1H5 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Gcgr-201ENSMUST00000026119 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv20A0A0B4J1H5 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
Trbv20A0A0B4J1H5 2310034G01Rik-201ENSMUST00000189008 1373 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 Gm9954-202ENSMUST00000198686 4725 ntBASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 Gm15820-201ENSMUST00000201566 728 ntBASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv20A0A0B4J1H5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC16.38■□□□□ 0.21
Trbv20A0A0B4J1H5 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms