Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trbv5A0A0B4J1G9 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 Krt8-ps-201ENSMUST00000208495 945 ntBASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 Gm7292-201ENSMUST00000194706 2527 ntBASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 Slc35f4-204ENSMUST00000138884 1810 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 B4gat1-201ENSMUST00000053705 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC14.75□□□□□ -0.05
Trbv5A0A0B4J1G9 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 P2rx4-202ENSMUST00000081554 1887 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trbv5A0A0B4J1G9 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trbv5A0A0B4J1G9 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv5A0A0B4J1G9 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.73□□□□□ -0.05
Trbv5A0A0B4J1G9 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv5A0A0B4J1G9 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv5A0A0B4J1G9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv5A0A0B4J1G9 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv5A0A0B4J1G9 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Trbv5A0A0B4J1G9 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv5A0A0B4J1G9 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv5A0A0B4J1G9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv5A0A0B4J1G9 Anapc16-204ENSMUST00000182898 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv5A0A0B4J1G9 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv5A0A0B4J1G9 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv5A0A0B4J1G9 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv5A0A0B4J1G9 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv5A0A0B4J1G9 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trbv5A0A0B4J1G9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv5A0A0B4J1G9 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv5A0A0B4J1G9 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv5A0A0B4J1G9 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
Trbv5A0A0B4J1G9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
Trbv5A0A0B4J1G9 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv5A0A0B4J1G9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv5A0A0B4J1G9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv5A0A0B4J1G9 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv5A0A0B4J1G9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv5A0A0B4J1G9 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv5A0A0B4J1G9 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv5A0A0B4J1G9 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trbv5A0A0B4J1G9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv5A0A0B4J1G9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv5A0A0B4J1G9 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv5A0A0B4J1G9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trbv5A0A0B4J1G9 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
Trbv5A0A0B4J1G9 Gm43294-201ENSMUST00000202850 2490 ntBASIC14.71□□□□□ -0.05
Trbv5A0A0B4J1G9 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv5A0A0B4J1G9 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv5A0A0B4J1G9 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv5A0A0B4J1G9 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.71□□□□□ -0.05
Trbv5A0A0B4J1G9 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv5A0A0B4J1G9 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv5A0A0B4J1G9 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trbv5A0A0B4J1G9 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv5A0A0B4J1G9 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Trbv5A0A0B4J1G9 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv5A0A0B4J1G9 Acot7-201ENSMUST00000030779 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trbv5A0A0B4J1G9 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 48.7 ms