Protein–RNA interactions for Protein: A0A0B4J1G8

Trbv2, T cell receptor beta, variable 2 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv2A0A0B4J1G8 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv2A0A0B4J1G8 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Trbv2A0A0B4J1G8 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC16.27■□□□□ 0.2
Trbv2A0A0B4J1G8 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC16.27■□□□□ 0.2
Trbv2A0A0B4J1G8 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC16.27■□□□□ 0.2
Trbv2A0A0B4J1G8 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
Trbv2A0A0B4J1G8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv2A0A0B4J1G8 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
Trbv2A0A0B4J1G8 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Trbv2A0A0B4J1G8 Marc2-201ENSMUST00000068725 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv2A0A0B4J1G8 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv2A0A0B4J1G8 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv2A0A0B4J1G8 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Trbv2A0A0B4J1G8 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv2A0A0B4J1G8 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv2A0A0B4J1G8 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv2A0A0B4J1G8 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv2A0A0B4J1G8 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv2A0A0B4J1G8 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv2A0A0B4J1G8 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv2A0A0B4J1G8 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv2A0A0B4J1G8 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv2A0A0B4J1G8 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv2A0A0B4J1G8 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC16.26■□□□□ 0.19
Trbv2A0A0B4J1G8 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Trbv2A0A0B4J1G8 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv2A0A0B4J1G8 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv2A0A0B4J1G8 M5C1000I18Rik-202ENSMUST00000186205 1414 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv2A0A0B4J1G8 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv2A0A0B4J1G8 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Trbv2A0A0B4J1G8 Tgds-204ENSMUST00000228543 1594 ntBASIC16.26■□□□□ 0.19
Trbv2A0A0B4J1G8 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 Gm10167-201ENSMUST00000150411 1479 ntBASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 Wdr70-203ENSMUST00000227371 1130 ntBASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 Il15ra-201ENSMUST00000078834 1600 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 Znrf1-205ENSMUST00000172856 4600 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 Gm6598-201ENSMUST00000202719 2615 ntBASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Trbv2A0A0B4J1G8 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv2A0A0B4J1G8 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv2A0A0B4J1G8 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv2A0A0B4J1G8 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv2A0A0B4J1G8 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Trbv2A0A0B4J1G8 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv2A0A0B4J1G8 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Trbv2A0A0B4J1G8 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv2A0A0B4J1G8 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv2A0A0B4J1G8 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv2A0A0B4J1G8 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv2A0A0B4J1G8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv2A0A0B4J1G8 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Trbv2A0A0B4J1G8 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 Gm8309-201ENSMUST00000206627 1448 ntBASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 Mir7075-201ENSMUST00000184187 82 ntBASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 Gm43173-201ENSMUST00000202246 593 ntBASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 Txndc15-201ENSMUST00000021959 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
Trbv2A0A0B4J1G8 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Gm38205-201ENSMUST00000192243 258 ntBASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Trbv2A0A0B4J1G8 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms