Protein–RNA interactions for Protein: A0A0A6YY38

Ighv1-42, Immunoglobulin heavy variable V1-42 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-42A0A0A6YY38 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-42A0A0A6YY38 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-42A0A0A6YY38 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-42A0A0A6YY38 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-42A0A0A6YY38 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Ighv1-42A0A0A6YY38 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.95■□□□□ 0.3
Ighv1-42A0A0A6YY38 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-42A0A0A6YY38 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-42A0A0A6YY38 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ighv1-42A0A0A6YY38 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.94■□□□□ 0.3
Ighv1-42A0A0A6YY38 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.94■□□□□ 0.3
Ighv1-42A0A0A6YY38 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
Ighv1-42A0A0A6YY38 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.94■□□□□ 0.3
Ighv1-42A0A0A6YY38 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
Ighv1-42A0A0A6YY38 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-42A0A0A6YY38 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-42A0A0A6YY38 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Ighv1-42A0A0A6YY38 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC16.94■□□□□ 0.3
Ighv1-42A0A0A6YY38 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 AB041806-201ENSMUST00000062902 2105 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Ighv1-42A0A0A6YY38 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-42A0A0A6YY38 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-42A0A0A6YY38 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-42A0A0A6YY38 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-42A0A0A6YY38 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-42A0A0A6YY38 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-42A0A0A6YY38 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Ighv1-42A0A0A6YY38 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Ighv1-42A0A0A6YY38 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Ighv1-42A0A0A6YY38 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Ighv1-42A0A0A6YY38 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-42A0A0A6YY38 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC16.91■□□□□ 0.3
Ighv1-42A0A0A6YY38 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC16.91■□□□□ 0.3
Ighv1-42A0A0A6YY38 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-42A0A0A6YY38 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-42A0A0A6YY38 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC16.91■□□□□ 0.3
Ighv1-42A0A0A6YY38 Gm15375-201ENSMUST00000119510 849 ntBASIC16.91■□□□□ 0.3
Ighv1-42A0A0A6YY38 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC16.91■□□□□ 0.3
Ighv1-42A0A0A6YY38 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-42A0A0A6YY38 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-42A0A0A6YY38 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-42A0A0A6YY38 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Ighv1-42A0A0A6YY38 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC16.9■□□□□ 0.3
Ighv1-42A0A0A6YY38 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-42A0A0A6YY38 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ighv1-42A0A0A6YY38 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-42A0A0A6YY38 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-42A0A0A6YY38 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-42A0A0A6YY38 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-42A0A0A6YY38 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC16.9■□□□□ 0.3
Ighv1-42A0A0A6YY38 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-42A0A0A6YY38 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-42A0A0A6YY38 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-42A0A0A6YY38 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-42A0A0A6YY38 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.9■□□□□ 0.3
Ighv1-42A0A0A6YY38 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC16.9■□□□□ 0.3
Ighv1-42A0A0A6YY38 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Ighv1-42A0A0A6YY38 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC16.9■□□□□ 0.3
Ighv1-42A0A0A6YY38 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-42A0A0A6YY38 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-42A0A0A6YY38 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Ighv1-42A0A0A6YY38 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
Ighv1-42A0A0A6YY38 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Ighv1-42A0A0A6YY38 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-42A0A0A6YY38 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ighv1-42A0A0A6YY38 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Ighv1-42A0A0A6YY38 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-42A0A0A6YY38 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-42A0A0A6YY38 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-42A0A0A6YY38 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.89■□□□□ 0.29
Ighv1-42A0A0A6YY38 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-42A0A0A6YY38 Hdhd5-201ENSMUST00000075303 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-42A0A0A6YY38 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-42A0A0A6YY38 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-42A0A0A6YY38 Gm15853-202ENSMUST00000195518 2041 ntBASIC16.89■□□□□ 0.29
Ighv1-42A0A0A6YY38 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.89■□□□□ 0.29
Ighv1-42A0A0A6YY38 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Ighv1-42A0A0A6YY38 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-42A0A0A6YY38 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-42A0A0A6YY38 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-42A0A0A6YY38 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Ighv1-42A0A0A6YY38 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms