Protein–RNA interactions for Protein: A0A0A6YWQ1

Trbv23, T cell receptor beta, variable V23 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv23A0A0A6YWQ1 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv23A0A0A6YWQ1 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv23A0A0A6YWQ1 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv23A0A0A6YWQ1 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.76■□□□□ 0.11
Trbv23A0A0A6YWQ1 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv23A0A0A6YWQ1 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv23A0A0A6YWQ1 Orai3-201ENSMUST00000061587 1996 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv23A0A0A6YWQ1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv23A0A0A6YWQ1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.76■□□□□ 0.11
Trbv23A0A0A6YWQ1 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC15.76■□□□□ 0.11
Trbv23A0A0A6YWQ1 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv23A0A0A6YWQ1 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv23A0A0A6YWQ1 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv23A0A0A6YWQ1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv23A0A0A6YWQ1 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trbv23A0A0A6YWQ1 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Trbv23A0A0A6YWQ1 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Trbv23A0A0A6YWQ1 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Gm6139-201ENSMUST00000079261 882 ntBASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Trbv23A0A0A6YWQ1 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Krt4-201ENSMUST00000023797 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Trbv23A0A0A6YWQ1 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Gm38308-201ENSMUST00000194934 1809 ntBASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
Trbv23A0A0A6YWQ1 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv23A0A0A6YWQ1 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv23A0A0A6YWQ1 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv23A0A0A6YWQ1 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv23A0A0A6YWQ1 Tmem234-201ENSMUST00000102591 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv23A0A0A6YWQ1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv23A0A0A6YWQ1 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv23A0A0A6YWQ1 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC15.72■□□□□ 0.11
Trbv23A0A0A6YWQ1 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC15.72■□□□□ 0.11
Trbv23A0A0A6YWQ1 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv23A0A0A6YWQ1 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Trbv23A0A0A6YWQ1 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv23A0A0A6YWQ1 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv23A0A0A6YWQ1 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Trbv23A0A0A6YWQ1 Gm10571-201ENSMUST00000097869 1638 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms