Protein–RNA interactions for Protein: A0A075B6B4

Trav6-4, T cell receptor alpha variable 6-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-4A0A075B6B4 Actl6b-205ENSMUST00000139395 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Gm7856-201ENSMUST00000117514 1493 ntBASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Gm42555-201ENSMUST00000199304 1039 ntBASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Mink1-205ENSMUST00000102559 4865 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav6-4A0A075B6B4 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-4A0A075B6B4 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-4A0A075B6B4 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-4A0A075B6B4 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-4A0A075B6B4 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-4A0A075B6B4 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-4A0A075B6B4 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav6-4A0A075B6B4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav6-4A0A075B6B4 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-4A0A075B6B4 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-4A0A075B6B4 Gm6627-201ENSMUST00000218299 2386 ntBASIC14.12□□□□□ -0.15
Trav6-4A0A075B6B4 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-4A0A075B6B4 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-4A0A075B6B4 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav6-4A0A075B6B4 Gm15853-202ENSMUST00000195518 2041 ntBASIC14.12□□□□□ -0.15
Trav6-4A0A075B6B4 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Naa50-202ENSMUST00000063542 2136 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Gm37179-201ENSMUST00000194862 823 ntBASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Slc35b2-207ENSMUST00000226086 850 ntBASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav6-4A0A075B6B4 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav6-4A0A075B6B4 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-4A0A075B6B4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-4A0A075B6B4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-4A0A075B6B4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav6-4A0A075B6B4 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.1□□□□□ -0.15
Trav6-4A0A075B6B4 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-4A0A075B6B4 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-4A0A075B6B4 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.1□□□□□ -0.15
Trav6-4A0A075B6B4 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-4A0A075B6B4 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.1□□□□□ -0.15
Trav6-4A0A075B6B4 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-4A0A075B6B4 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-4A0A075B6B4 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-4A0A075B6B4 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-4A0A075B6B4 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-4A0A075B6B4 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-4A0A075B6B4 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav6-4A0A075B6B4 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Faxc-201ENSMUST00000029908 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Mir5133-201ENSMUST00000174955 77 ntBASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Txnrd2-203ENSMUST00000115606 1905 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 6030445D17Rik-201ENSMUST00000084593 1728 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trav6-4A0A075B6B4 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 37.3 ms