Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC15.04■□□□□ -0
Trav18A0A075B656 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC15.04■□□□□ -0
Trav18A0A075B656 Gm19094-201ENSMUST00000209791 1246 ntBASIC15.04■□□□□ -0
Trav18A0A075B656 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC15.04■□□□□ -0
Trav18A0A075B656 Usp36-201ENSMUST00000092382 5609 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Trav18A0A075B656 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav18A0A075B656 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Trav18A0A075B656 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav18A0A075B656 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav18A0A075B656 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav18A0A075B656 CT010467.1-202ENSMUST00000205406 714 ntBASIC15.03■□□□□ -0
Trav18A0A075B656 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav18A0A075B656 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC15.03■□□□□ -0
Trav18A0A075B656 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav18A0A075B656 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Trav18A0A075B656 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav18A0A075B656 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Trav18A0A075B656 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC15.03■□□□□ -0
Trav18A0A075B656 Aamp-201ENSMUST00000006462 1817 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Trav18A0A075B656 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Trav18A0A075B656 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav18A0A075B656 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav18A0A075B656 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Trav18A0A075B656 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav18A0A075B656 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav18A0A075B656 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav18A0A075B656 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav18A0A075B656 Gm45141-201ENSMUST00000206502 1888 ntBASIC15.02■□□□□ -0
Trav18A0A075B656 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav18A0A075B656 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav18A0A075B656 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Trav18A0A075B656 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav18A0A075B656 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.02■□□□□ -0
Trav18A0A075B656 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC15.02■□□□□ -0
Trav18A0A075B656 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Trav18A0A075B656 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC15.02■□□□□ -0
Trav18A0A075B656 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Trav18A0A075B656 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC15.02□□□□□ -0.01
Trav18A0A075B656 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
Trav18A0A075B656 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav18A0A075B656 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav18A0A075B656 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Trav18A0A075B656 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav18A0A075B656 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav18A0A075B656 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav18A0A075B656 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav18A0A075B656 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav18A0A075B656 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Trav18A0A075B656 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav18A0A075B656 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav18A0A075B656 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav18A0A075B656 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC15.01□□□□□ -0.01
Trav18A0A075B656 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav18A0A075B656 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav18A0A075B656 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav18A0A075B656 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav18A0A075B656 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav18A0A075B656 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC15.01□□□□□ -0.01
Trav18A0A075B656 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.01□□□□□ -0.01
Trav18A0A075B656 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav18A0A075B656 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Trav18A0A075B656 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav18A0A075B656 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Trav18A0A075B656 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC15.01□□□□□ -0.01
Trav18A0A075B656 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav18A0A075B656 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Trav18A0A075B656 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Trav18A0A075B656 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav18A0A075B656 Gm45606-201ENSMUST00000209836 2795 ntBASIC15□□□□□ -0.01
Trav18A0A075B656 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav18A0A075B656 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav18A0A075B656 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Trav18A0A075B656 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav18A0A075B656 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav18A0A075B656 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav18A0A075B656 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Trav18A0A075B656 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15□□□□□ -0.01
Trav18A0A075B656 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Trav18A0A075B656 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Trav18A0A075B656 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Trav18A0A075B656 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC15□□□□□ -0.01
Trav18A0A075B656 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Trav18A0A075B656 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav18A0A075B656 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Trav18A0A075B656 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav18A0A075B656 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC14.99□□□□□ -0.01
Trav18A0A075B656 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav18A0A075B656 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav18A0A075B656 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC14.99□□□□□ -0.01
Trav18A0A075B656 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav18A0A075B656 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav18A0A075B656 Gm9988-201ENSMUST00000069786 435 ntBASIC14.99□□□□□ -0.01
Trav18A0A075B656 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC14.99□□□□□ -0.01
Trav18A0A075B656 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav18A0A075B656 Fst-202ENSMUST00000223640 2612 ntBASIC14.99□□□□□ -0.01
Trav18A0A075B656 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav18A0A075B656 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Trav18A0A075B656 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.99□□□□□ -0.01
Trav18A0A075B656 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Trav18A0A075B656 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms