Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.57□□□□□ -0.08
Trav17A0A075B655 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav17A0A075B655 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Trav17A0A075B655 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav17A0A075B655 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Trav17A0A075B655 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav17A0A075B655 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav17A0A075B655 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.57□□□□□ -0.08
Trav17A0A075B655 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
Trav17A0A075B655 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.57□□□□□ -0.08
Trav17A0A075B655 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav17A0A075B655 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Trav17A0A075B655 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav17A0A075B655 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav17A0A075B655 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav17A0A075B655 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav17A0A075B655 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav17A0A075B655 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav17A0A075B655 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
Trav17A0A075B655 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav17A0A075B655 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav17A0A075B655 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav17A0A075B655 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav17A0A075B655 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav17A0A075B655 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC14.56□□□□□ -0.08
Trav17A0A075B655 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav17A0A075B655 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav17A0A075B655 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Trav17A0A075B655 Gm5828-201ENSMUST00000071842 1860 ntBASIC14.56□□□□□ -0.08
Trav17A0A075B655 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.56□□□□□ -0.08
Trav17A0A075B655 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav17A0A075B655 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Trav17A0A075B655 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Trav17A0A075B655 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Trav17A0A075B655 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav17A0A075B655 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav17A0A075B655 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav17A0A075B655 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav17A0A075B655 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav17A0A075B655 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav17A0A075B655 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav17A0A075B655 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC14.55□□□□□ -0.08
Trav17A0A075B655 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
Trav17A0A075B655 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav17A0A075B655 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav17A0A075B655 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav17A0A075B655 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trav17A0A075B655 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.55□□□□□ -0.08
Trav17A0A075B655 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Trav17A0A075B655 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav17A0A075B655 Memo1-201ENSMUST00000078459 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav17A0A075B655 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trav17A0A075B655 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav17A0A075B655 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trav17A0A075B655 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav17A0A075B655 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav17A0A075B655 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trav17A0A075B655 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav17A0A075B655 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav17A0A075B655 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav17A0A075B655 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav17A0A075B655 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav17A0A075B655 Gm11421-201ENSMUST00000122124 294 ntBASIC14.54□□□□□ -0.08
Trav17A0A075B655 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav17A0A075B655 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav17A0A075B655 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav17A0A075B655 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav17A0A075B655 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav17A0A075B655 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav17A0A075B655 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trav17A0A075B655 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC14.54□□□□□ -0.08
Trav17A0A075B655 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trav17A0A075B655 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
Trav17A0A075B655 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav17A0A075B655 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trav17A0A075B655 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav17A0A075B655 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav17A0A075B655 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav17A0A075B655 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav17A0A075B655 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav17A0A075B655 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav17A0A075B655 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav17A0A075B655 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav17A0A075B655 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC14.53□□□□□ -0.08
Trav17A0A075B655 Gm43137-201ENSMUST00000198052 594 ntBASIC14.53□□□□□ -0.08
Trav17A0A075B655 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav17A0A075B655 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav17A0A075B655 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trav17A0A075B655 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trav17A0A075B655 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.53□□□□□ -0.08
Trav17A0A075B655 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trav17A0A075B655 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC14.52□□□□□ -0.08
Trav17A0A075B655 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav17A0A075B655 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Trav17A0A075B655 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav17A0A075B655 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav17A0A075B655 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav17A0A075B655 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav17A0A075B655 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Trav17A0A075B655 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms